Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF08
Confidence90.10%DateThu Jan 5 11:24:49 GMT 2012
Rank315Aligned Residues38
% Identity18%Templatec3ld9D_
PDB info PDB header:transferaseChain: D: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase from ehrlichia chaffeensis at2 2.15a resolution
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130.........140...
Predicted Secondary structure 












Query SS confidence 





































Query Sequence  VKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILD
Query Conservation      


 
 







 
 


  

  
  




Alig confidence 





































Template Conservation   

 

 


 






    
   
        
  
Template Sequence  PGSMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVL
Template Known Secondary structure 



STTSS
GGG
Template Predicted Secondary structure 













Template SS confidence 





































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions