Job Description P0AF08 Confidence 92.20% Date Thu Jan 5 11:24:49 GMT 2012 Rank 240 Aligned Residues 72 % Identity 24% Template c3hn7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: crystal structure of a murein peptide ligase mpl (psyc_0032) from2 psychrobacter arcticus 273-4 at 1.65 a resolution Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	M	P	F	V	W	H	S	A	F	E	E	L	K	E	Q	C	S	A	E	L	L	R	I	T	G	A	K	A	I	D	W	K	L	S	H	N	I	A	T	L	K	R	V	K	N	Q	P	G	I	N	G	V	K	N	I	I	A	V	S	S	G	K	G	G	V	G	K	S	S	T	A	V	N	L	A	L	A	L
Query Conservation
Alig confidence																						.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation																						.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Sequence		L	V	V	V	G	N	A	X	K	R	G	X	D	V	I	E	Y	X	L	D	.	.	T	G	L	R	Y	T	S	G	P	Q	F	L	S	E	Q	V	L	Q	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	I	A	V	A	.	.	.	G	T	H	G	K	T	T	T	T	T	X	L	A	W	I	L
Template Known Secondary structure							T	T			T	T	S									.	.		T														T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.		S	S
Template Predicted Secondary structure																						.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.														.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	G	A	K	V	G	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Y	A	G	I	D	A	G	F	L
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions