Job Description P0AF08 Confidence 99.97% Date Thu Jan 5 11:24:49 GMT 2012 Rank 23 Aligned Residues 201 % Identity 14% Template c3ezfA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:para; PDBTitle: partition protein Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		T	L	K	R	V	K	N	Q	P	G	I	N	G	V	K	N	I	I	A	V	S	S	G	K	G	G	V	G	K	S	S	T	A	V	N	L	A	L	A	L	A	A	E	G	A	K	V	G	I	L	D	A	D	I	Y	G	P	S	I	P	T	M	L	G	A	E	N	Q	R	P	T	S	P	D	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																							.	.																		.																		.	.	.	.	.	.
Template Conservation																																							.	.																		.
Template Sequence		A	H	R	K	I	P	K	Y	R	D	I	H	K	S	P	Y	V	I	F	V	V	N	L	S	T	V	T	L	A	H	A	L	R	V	H	Q	D	.	.	L	L	R	H	D	L	R	I	L	V	I	D	L	D	P	Q	A	.	S	S	T	M	F	L	G	S	I	L	E	T	A	A	Q	A	M	L	N	N	L	D	A
Template Known Secondary structure				T	T				G	G	G	T	S		S																						G	G	.	.	G	G	G	G											T	T		.	T	T	T	T	T														T	T
Template Predicted Secondary structure																																							.	.																		.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
						167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																														.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																														.	.	.	.	.	.	.
Query Sequence		.	.	.	.	G	T	H	M	A	P	I	M	S	H	G	L	A	T	N	S	I	G	Y	L	V	T	D	D	N	A	M	V	W	.	.	.	.	.	.	.	R	G	P	M	A	S	K	A	L	M	Q	M	L	Q	E	T	L	W	P	D	L	D	Y	L	V	L	D	M	P	P	G	T	G	D	I	Q	L	T	L	A
Query Conservation		.	.	.	.																														.	.	.	.	.	.	.
Alig confidence		.	.	.	.																														.	.	.	.	.	.	.																																		.	.
Template Conservation																																																																											.	.
Template Sequence		E	T	L	R	K	E	V	I	R	P	T	I	V	P	G	V	D	V	I	P	A	S	I	D	D	G	F	V	A	S	Q	W	R	E	L	V	E	E	H	L	P	G	Q	N	Q	Y	E	I	L	R	R	N	I	I	D	R	V	A	D	D	Y	D	F	I	F	I	D	T	G	P	H	L	D	.	.	P	F	L	L	N
Template Known Secondary structure							T	T	S	B			S	S	T	T								S	S						T	T									S	T	T			T	T	T						T	T	T	T	S	G	G	G		S								S	S			.	.
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	I	P	V	T	G	A	V	V	V	T	T	P	Q	D	I	A	L	I	D	A	K	K	G	I	V	M	F	E	K	.	.	.	.	.	.	.	.	.	V	E	V	P	V	L	G	I	V	E	N	M	S	V	H	I	C	S	N	C	G	H	H	E	P	I	F	G	T	G	G	A
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	A	A	S	D	L	L	L	T	P	T	P	P	A	Q	V	D	F	H	S	T	L	K	Y	L	T	R	L	P	E	M	L	E	Q	L	E	E	E	G	V	E	P	R	L	S	A	S	I	G	F	M	S	K	M	T	G	K	R	D	H	E	T	S	H	S	L	A	R	E	V	Y
Template Known Secondary structure				T	T		S									S												T	T											T	T													B	S			S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions