Job Description P0AF08 Confidence 100.00% Date Thu Jan 5 11:24:49 GMT 2012 Rank 3 Aligned Residues 239 % Identity 21% Template c3endA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase PDBTitle: crystal structure of the l protein of rhodobacter2 sphaeroides light-independent protochlorophyllide3 reductase (bchl) with mgadp bound: a homologue of the4 nitrogenase fe protein Resolution 1.63 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.												.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	N	I	I	A	V	S	S	G	K	G	G	V	G	K	S	S	T	A	V	N	L	A	L	A	L	A	A	E	G	A	K	V	G	I	L	D	A	D	I	Y	G	P	S	I	P	T	M	L	G	A	E	N	Q	R	P	T	.	.	.	.	.	.	.	.	.	.	.	S	P	D	G	T	H	M	A	P	I	M
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		G	A	K	V	F	A	V	Y	G	.	K	G	G	I	G	K	S	T	T	S	S	N	L	S	A	A	F	S	I	L	G	K	R	V	L	Q	I	G	C	D	P	K	H	D	S	T	F	T	L	T	G	S	L	V	P	T	V	I	D	V	L	K	D	V	D	F	H	P	E	E	L	R	P	E	D	F	V	F	E	G
Template Known Secondary structure											.	S	T	T	S	S															T	T									S	S	S			T	T					T	S												T	T	S		G	G	G
Template Predicted Secondary structure											.
Template SS confidence
		30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	G	L	A	T	N	S	I	G	Y	L	V	T	D	D	N	A	M	V	W	R	G	P	M	A	S	K	A	L	M	Q	M	L	Q	E	T	L	W	P	D	L	D	Y	L	V	L	D	M	P	P	G	T	G	D	I	Q	L	T	L	A	Q	N	I	P	V	T	G	A	V	V	V	T	T	P	Q	D	I	A	L
Query Conservation
Alig confidence															.	.	.																																							.
Template Conservation															.	.	.																																							.
Template Sequence		F	N	G	V	M	C	V	E	A	G	G	P	P	.	.	.	A	G	T	G	C	G	G	Y	V	V	G	Q	T	V	K	L	L	K	Q	H	H	L	L	D	D	T	D	V	V	I	F	D	V	L	G	D	V	V	.	C	G	G	F	A	A	P	L	Q	H	A	D	Q	A	V	V	V	T	A	N	D	F	D	S	I
Template Known Secondary structure		G	G	G											.	.	.	S	S	S	S		T	T													T	T	T	T	S	S		S									S	S		.		G	G	G	G	G	G	G	G	T		S								S	S
Template Predicted Secondary structure															.	.	.																																							.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		I	D	A	K	K	G	I	V	M	F	E	K	V	.	.	.	.	E	V	P	V	L	G	I	V	E	N	M	S	V	H	I	C	S	N	C	G	H	H	E	P	I	F	G	T	G	G	A	E	K	L	A	E	K	Y	H	T	Q	L	L	G	Q	M	P	L	H	I	S	L	R	E	D	L	D	K	G	T	P	T	V
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	M	N	R	I	I	A	A	V	Q	A	K	S	K	N	Y	K	V	R	L	A	G	C	V	A	N	R	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	D	E	V	D	R	F	C	K	E	T	N	F	R	R	L	A	H	M	P	D	L	D	A	I	R	R	S	R	L	K	K	K	T	L	F
Template Known Secondary structure													T	T	T	T	T												S		S	.	.	.	.	.	.	.	.	.	.	.	.	.													T																			T	T			T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.														.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		331	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		I	S	R	P	E	S	E	F	T	A	I	.	.	.	Y	R	Q	L	A	D	R	V	A	A	Q	L	Y	W	Q	G	E	V	I	P	G	E	I	S
Query Conservation													.	.	.
Alig confidence													.	.	.															.	.	.
Template Conservation																														.	.	.
Template Sequence		E	M	D	E	D	Q	D	V	L	A	A	R	A	E	Y	I	R	L	A	E	S	L	W	R	G	L	D	P	.	.	.	I	D	P	H	S	L	P
Template Known Secondary structure		T	S																											.	.	.
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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