Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF08
Confidence92.82%DateThu Jan 5 11:24:49 GMT 2012
Rank222Aligned Residues33
% Identity33%Templatec3eagA_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso- PDBTitle: the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-2 glutamyl-meso-diaminopimelate ligase (mpl) from neisseria3 meningitides
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140..
Predicted Secondary structure 











Query SS confidence 



































Query Sequence  KNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGIL
Query Conservation     


 
 







 
 


  

  
  



Alig confidence 









...






















Template Conservation     
 




...




  

  

   
      
Template Sequence  HWVLGVAGTH. . . GKTTTASXLAWVLEYAGLAPGFL
Template Known Secondary structure  SSSS...
TT


Template Predicted Secondary structure 




...






Template SS confidence 



































   105....110.... .....120.........130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions