Job Description P0AF08 Confidence 100.00% Date Thu Jan 5 11:24:49 GMT 2012 Rank 18 Aligned Residues 192 % Identity 22% Template c3cwqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:para family chromosome partitioning protein; PDBTitle: crystal structure of chromosome partitioning protein (para) in complex2 with adp from synechocystis sp. northeast structural genomics3 consortium target sgr89 Resolution 2.47 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	A	V	S	S	G	K	G	G	V	G	K	S	S	T	A	V	N	L	A	L	A	L	A	A	E	G	A	K	V	G	I	L	D	A	D	I	Y	G	P	S	I	P	T	M	L	G	A	E	N	Q	R	P	T	S	P	D	G	T	H	M	A	P	I	M	S	H	G	L	A	T	N	S	I	G	Y	L	V	T
Query Conservation
Alig confidence																														.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	T	V	A	S	F	K	G	G	V	G	K	T	T	T	A	V	H	L	S	A	Y	L	A	L	Q	G	.	E	T	L	L	I	D	G	D	P	N	R	.	S	A	T	G	W	G	K	R	G	S	L	P	F	K	V	V	D	E	R	Q	A	A	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S	S	S	S	S																S	.									T	T		.								T	S			S	S					G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	N	A	M	V	W	R	G	P	M	A	S	K	A	L	M	Q	M	L	Q	E	T	L	W	P	D	L	D	Y	L	V	L	D	M	P	P	G	T	G	D	I	Q	L	T	L	A	Q	N	I	P	V	T	G	A	V	V	V	T	T	P	Q	D	I	A	L	I	D	A	K	K	G	I	V	M	F	E	K	V	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	K	Y	Q	N	I	V	I	D	T	Q	A	R	D	.	.	.	.	.	L	E	A	L	A	D	G	C	D	L	L	V	I	P	S	T	P	D	A	L	A	L	D	A	L	X	L	T	I	E	T	L	Q	K	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		S											.	.	.	.	.							T	S	S								S	S										T						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
																										65	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																												.																							.	.
Query SS confidence																																												.																							.	.
Query Sequence		V	P	V	L	G	I	V	E	N	M	S	V	H	I	C	S	N	C	G	H	H	E	P	I	F	G	T	G	G	A	E	K	L	A	E	K	Y	H	T	Q	L	L	.	G	Q	M	P	L	H	I	S	L	R	E	D	L	D	K	G	T	P	T	V	I	S	.	.	R	P	E	S	E	F	T	A	I	Y	R	Q	L
Query Conservation																																												.																							.	.
Alig confidence																			.	.	.	.	.	.	.	.																		.																							.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		N	N	R	F	R	I	L	L	T	I	I	P	P	Y	P	S	K	.	.	.	.	.	.	.	.	D	G	D	E	A	R	Q	L	L	T	T	A	G	L	P	L	F	K	R	G	I	K	R	Y	S	A	F	Q	K	A	S	L	N	G	V	V	V	S	E	V	S	D	S	K	A	G	I	A	W	S	D	Y	K	A	T
Template Known Secondary structure		G	G	G							S	B			T	T			.	.	.	.	.	.	.	.												T	T			B		S				B												T	S		G	G	G	S	S	S	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		346	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	R	V	A	A	Q	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	E	I	V	E	E	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions