 |
Job Description | P0AF08 | Confidence | 96.35% | Date | Thu Jan 5 11:24:49 GMT 2012 |
Rank | 103 | Aligned Residues | 43 |
% Identity | 30% | Template | c3c8uA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:fructokinase; |
PDBTitle: crystal structure of putative fructose transport system kinase2 (yp_612366.1) from silicibacter sp. tm1040 at 1.95 a resolution
|
Resolution | 1.95 Å |
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | N | G | V | K | N | I | I | A | V | S | S | G | K | G | G | V | G | K | S | S | T | A | V | N | L | A | L | A | L | A | A | E | G | A | K | V | G | I | L | D | A | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|
| . |
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
P | R | Q | P | G | R | Q | L | V | A | L | S | G | A | P | G | S | . |
G | K | S | T | L | S | N | P | L | A | A | A | L | S | A | Q | G | L | P | A | E | V | V | P | X | D |
Template Known Secondary structure |   |
T | T |
|
| S |
|  |  |  |  |  |  |
|
| T | T | S | . |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|