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Job DescriptionP0AF08
Confidence100.00%DateThu Jan 5 11:24:49 GMT 2012
Rank19Aligned Residues225
% Identity21%Templatec2wooC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:atpase get3; PDBTitle: nucleotide-free form of s. pombe get3
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.........170......... 180
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Query Sequence  NIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLA. . . . . . . T
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Template Sequence  KWI. FVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDP. AHNLSDAFGTKFGKDARKVPGFDNLSAMEIDPNLSIQEMT
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SSSSSTSSS


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TT
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   20.. .......30.........40.........50....... ..60.........70.........80.........90.......
 
   181........190.........200.........210.........220.........230..
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Query Sequence  NSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQL. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EQALSGMMQDLAFTIPGIDEALAFAEILKQIKSMEFDCVIFDTAPTGHTLRFLNFPTVLEKALGKLGGLSSRFGPMINQM
Template Known Secondary structure  T

TTSTTT

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TTTGGGTS
TT
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   233......240.........250.........260.........270......... 280.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . TLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMS. . . . VHICSN
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Template Sequence  GSIMGQDLFGKMESMRANISEVNKQFKNPDLTTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLDPNTTCPQ
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   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   286...290.........300.........310.........320.........330.........340.........350.
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Query Sequence  CGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAA
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Template Sequence  CMARRKM. QQKYLAQIEELYEDFHVVKVPQVP. . . . . . . . . . . . . . . . AEVRGTEALKSFSEMLVK
Template Known Secondary structure  .TTTS

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STTTS
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   271...... ..280.........290.........300. ........310.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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