Job Description P0AF08 Confidence 99.96% Date Thu Jan 5 11:24:49 GMT 2012 Rank 32 Aligned Residues 203 % Identity 19% Template c2vedA_ PDB info PDB header:transferase Chain: A: PDB Molecule:membrane protein capa1, protein tyrosine kinase; PDBTitle: crystal structure of the chimerical mutant capabk55m2 protein Resolution 2.6 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	D	W	K	L	S	H	N	I	A	T	L	K	R	V	K	N	Q	P	G	I	N	G	V	K	N	I	I	A	V	S	S	G	K	G	G	V	G	K	S	S	T	A	V	N	L	A	L	A	L	A	A	E	G	A	K	V	G	I	L	D	A	D	I	Y	G	P	S	I	P	T	M	L	G	A	E	N	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	P	K	S	P	I	S	E	K	F	R	G	I	R	S	N	I	M	F	A	N	P	D	S	A	V	Q	S	I	V	I	T	S	E	A	P	G	A	G	M	S	T	I	A	A	N	L	A	V	A	Y	A	Q	A	G	Y	K	T	L	I	V	D	G	D	M	R	K	P	T	Q	H	Y	I	F	N	L	P	N	N	E
Template Known Secondary structure		S	T	T	S																T	S		S	S										S	S	T	T	S	S															T	T										S	S	S							T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		1016	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		P	T	S	P	D	G	T	H	M	A	P	I	M	S	H	G	L	A	.	T	N	S	I	G	Y	L	V	T	D	D	N	A	M	V	W	R	G	P	M	A	S	K	A	L	M	Q	M	L	Q	E	T	L	W	P	D	L	D	Y	L	V	L	D	M	P	P	G	T	G	D	I	Q	L	T	L	A	Q	N	I	P	V
Query Conservation																				.
Alig confidence																				.																																																		.
Template Conservation																																																																						.
Template Sequence		G	L	S	S	L	L	L	N	W	S	T	Y	Q	D	S	I	I	S	T	E	I	E	D	L	D	V	L	T	S	G	P	I	P	P	N	P	S	E	L	I	T	S	R	A	F	A	N	L	Y	D	T	L	L	M	N	Y	N	F	V	I	I	D	T	P	P	V	N	T	.	V	T	D	A	Q	L	F	S	K	F	T
Template Known Secondary structure		S						T	T	S	S										S	S	T	T								S			S							T	S															S									T	T	T	.		T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		1096	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.		.	.	.	.	.	.	1170	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	A	V	V	V	T	T	P	Q	D	I	A	L	I	D	A	K	K	G	I	V	M	F	E	K	V	E	V	P	V	L	G	I	V	E	N	M	S	V	H	I	C	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	V	V	Y	V	V	N	S	E	N	N	N	K	D	E	V	K	K	G	K	E	L	I	E	A	T	G	A	K	L	L	G	V	V	L	N	R	M	P	K	D	K	S	A
Template Known Secondary structure		S								T	T	S															T	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		1175	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions