Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF08
Confidence95.47%DateThu Jan 5 11:24:49 GMT 2012
Rank131Aligned Residues89
% Identity12%Templatec2rdo7_
PDB info PDB header:ribosomeChain: 7: PDB Molecule:elongation factor g; PDBTitle: 50s subunit with ef-g(gdpnp) and rrf bound
Resolution9.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230.........240.........250.........260.........270.........280.........290..
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  WPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPI
Query Conservation      
 



 


     
    
  

 



  
   
                    

 
               
Alig confidence 



























































.











.......
Template Conservation       








 

  

  

   







  


  

  

       

 
.







    .......
Template Sequence  YEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRI. AFVNKMDRMGAN. . . . . . .
Template Known Secondary structure  S







SS
T
S


TT
SS
STT

B
.

TTSTT

.......
Template Predicted Secondary structure 


















.







.......
Template SS confidence 















































































   7980.........90.........100.........110.........120.........130........ .140.........150
 
   293......300.........310
Predicted Secondary structure 



Query SS confidence 

















Query Sequence  FGTGGAEKLAEKYHTQLL
Query Conservation                   
Alig confidence  .
















Template Conservation  .           
     
Template Sequence  . FLKVVNQIKTRLGANPV
Template Known Secondary structure  .STS


Template Predicted Secondary structure  .


Template SS confidence 

















   151........160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions