Job Description P0AF08 Confidence 100.00% Date Thu Jan 5 11:24:49 GMT 2012 Rank 13 Aligned Residues 241 % Identity 12% Template c2ozeA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:orf delta'; PDBTitle: the crystal structure of delta protein of psm19035 from2 streptoccocus pyogenes Resolution 1.83 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.											.	.	.	.	170	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	V	K	N	I	I	A	V	S	S	G	K	G	G	V	G	K	S	S	T	A	V	N	L	A	L	A	L	A	A	E	G	A	K	V	G	I	L	D	A	D	I	Y	G	P	S	I	P	T	M	L	G	A	E	N	Q	R	P	T	S	P	.	.	.	.	.	.	.	.	.	.	D	G	T	H	M	A	P	I
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		K	N	E	A	I	V	I	L	N	N	Y	F	K	G	G	V	G	K	S	K	L	S	T	M	F	A	Y	L	T	D	K	L	N	L	K	V	L	M	I	D	K	D	L	Q	A	T	.	L	T	K	D	L	A	K	T	F	K	V	E	L	P	R	V	N	F	Y	E	G	L	K	N	G	N	L	A	S	S	I	V	H
Template Known Secondary structure				S									S	S	S	S	S	S															T	T										T	T			.						T	T	T	S						S	S									T			G	G	G
Template Predicted Secondary structure																																																.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		M	S	H	G	L	A	T	N	S	I	G	Y	L	V	T	D	D	N	A	M	V	W	R	G	P	M	A	S	K	A	L	M	.	Q	M	L	Q	E	T	L	W	P	D	L	D	Y	L	V	L	D	M	P	P	G	T	G	D	I	Q	L	T	L	A	Q	N	I	P	V	T	G	A	V	V	V	T	T	P	Q	D	I
Query Conservation																																		.
Alig confidence																																		.																								.	.
Template Conservation																																																										.	.
Template Sequence		L	T	D	N	L	D	L	I	P	G	T	F	D	L	M	L	L	P	K	L	T	R	S	W	T	F	E	N	E	S	R	L	L	A	T	L	L	A	P	L	K	S	D	Y	D	L	I	I	I	D	T	V	P	T	P	S	.	.	V	Y	T	N	N	A	I	V	A	S	D	Y	V	M	I	P	L	Q	A	E	E	E
Template Known Secondary structure		S	S	S	S								G	G	G	G	G					T	T	T	S							T							G	G	G	G	G	G		S								S	S		S	.	.											S								G	G	G
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		A	L	I	D	A	K	K	G	I	V	M	F	E	K	V	.	.	.	.	.	.	E	V	P	V	L	G	I	V	E	N	M	S	V	H	I	C	S	N	C	G	H	H	E	P	I	F	G	T	G	G	A	E	K	L	A	E	K	Y	H	T	Q	L	L	G	Q	M	P	L	H	I	S	L	R	E	D	L	D	K	G
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		S	T	N	N	I	Q	N	Y	I	S	Y	L	I	D	L	Q	E	Q	F	N	P	G	L	D	M	I	G	F	V	P	Y	L	V	D	T	D	S	A	T	I	K	S	N	L	E	E	.	.	.	.	.	L	Y	K	Q	H	K	E	D	N	L	V	F	Q	N	I	I	K	R	S	N	K	V	S	T	W	S	K	N	G
Template Known Secondary structure																						T	T											S		T	T											.	.	.	.	.					T	T	T	T			B		S	S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	T	V	I	S	R	P	E	S	E	F	T	A	I	Y	R	Q	L	A	D	R	V	A	A	Q	L
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		I	T	E	H	K	.	G	Y	D	K	K	V	L	S	M	Y	K	N	V	F	F	E	M	L	E	R	I
Template Known Secondary structure				S	S	S	.	T	T
Template Predicted Secondary structure							.
Template SS confidence
		265	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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