Job Description P0AF08 Confidence 99.59% Date Thu Jan 5 11:24:49 GMT 2012 Rank 41 Aligned Residues 219 % Identity 15% Template c1zu4A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ftsy; PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212 Resolution 1.95 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		V	W	H	S	A	F	E	E	L	K	E	Q	C	S	A	E	L	L	R	I	T	G	A	K	A	I	D	W	K	L	S	H	N	I	A	T	L	.	.	.	K	R	V	K	N	Q	P	G	I	N	G	V	K	N	I	I	A	V	S	S	G	K	G	G	V	G	K	S	S	T	A	V	N	L	A	L	A	L	A	A
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																						.
Template Conservation																																																															.
Template Sequence		M	G	M	K	M	V	L	K	V	S	N	L	V	R	K	K	T	K	R	D	T	S	F	E	N	I	K	D	A	L	V	E	S	L	Y	Q	A	Y	T	D	N	D	W	Y	R	I	D	F	K	E	N	R	L	N	I	F	M	L	V	G	V	.	N	G	T	G	K	T	T	S	L	A	K	M	A	N	Y	Y	A	E
Template Known Secondary structure																				T	T																					S									T	T	S								S	S	.	T	T	S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	A	K	V	G	I	L	D	A	D	I	Y	G	P	S	I	P	T	M	L	G	A	E	N	Q	R	P	T	S	P	D	G	T	H	M	A	P	I	M	S	H	G	L	A	T	N	S	I	G	Y	L	V	T	D	D	N	A	M	V	W	R	G	P	M	A	S	K	A	L	M	Q	M	L	Q	E	T	L	W	P
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	Y	K	V	L	I	A	A	A	D	T	F	R	A	G	A	T	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	E	E	W	I	K	T	R	L	N	N	K	V	D	L	V	K	A	N	K	L	N	A	D	P	A	S	V	.	.	.	.	.	.	.	.	.	.	V	F	D	A	I	K	K	A	K	E	Q
Template Known Secondary structure		T	T											S									.	.	.	.	.	.	.	.	.	.	.					T	T	T	S		T	T							S	S	T	T							.	.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.												.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270											.	.	.	.	.	.	.	.	.	280	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.														240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	D	Y	L	V	L	D	M	P	P	G	T	G	D	I	Q	L	T	L	A	Q	N	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	G	A	V	V	V	T	T	P	Q	D	I	A	L	I	D	A	K	K	G	I	V	M	F	E	K	V	E	V	P	V	L	G	I	V	E	N	M	S	V	H
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																.	.	.	.	.	.	.	.	.	.	.	.	.												.																				.	.
Template Conservation											.																																								.																				.	.
Template Sequence		N	Y	D	L	L	L	I	D	T	.	A	G	R	L	Q	N	K	T	N	L	M	A	E	L	E	K	M	N	K	I	I	Q	Q	V	E	K	S	A	P	H	E	V	L	L	V	I	D	A	T	.	T	G	Q	N	G	V	I	Q	A	E	E	F	S	K	V	A	D	V	S	.	.	G	I	I	L	T	K	M	D	S
Template Known Secondary structure		T		S							.				G	G	G																	T	T		T	T			S								G	G	.	G	T											T	T	T	S				.	.							G	G	G
Template Predicted Secondary structure											.																																								.																				.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	S	N	C	G	H	H	E	P	I	F	G	T	G	G	A	E	K	L	A	E	K	Y	H	T	Q	L	L	G	Q
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	K	.	.	.	.	.	.	.	.	.	.	G	G	I	G	L	A	I	K	E	L	L	N	I	P	I	K	M	I
Template Known Secondary structure			S		.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		358	.	360											.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions