Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF08
Confidence90.13%DateThu Jan 5 11:24:49 GMT 2012
Rank314Aligned Residues40
% Identity25%Templatec1sxjB_
PDB info PDB header:replicationChain: B: PDB Molecule:activator 1 37 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150
Predicted Secondary structure 

















Query SS confidence 







































Query Sequence  AVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPS
Query Conservation 

 
 







 
 


  

  
  




 
     
Alig confidence 







































Template Conservation 


 

 
 





  

  
                  
Template Sequence  MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDR
Template Known Secondary structure 
STTSSGGG
TTS

Template Predicted Secondary structure 























Template SS confidence 







































   45....50.........60.........70.........80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions