 |
Job Description | P08660 | Confidence | 99.91% | Date | Thu Jan 5 11:01:34 GMT 2012 |
Rank | 34 | Aligned Residues | 145 |
% Identity | 18% | Template | c2re1A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:aspartokinase, alpha and beta subunits; |
PDBTitle: crystal structure of aspartokinase alpha and beta subunits
|
Resolution | 2.75 Å |
|
 |
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | |
. | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | A | L | A | L | R | R | N | Q | T | L | L | T | L | H | S | L | N | M | L | H | S | R | G | F | L | A | E | V | F | G | I | L | A | R | H | N | I | S | V | D | L | I | T | . |
T | S | E | V | S | V | A | L | T | L | D | T | T | G | S | T | S | T | G | D | T | L | L | T | Q | S | L | L | M | E | L | S | A | L |
Query Conservation |   |
  |   |
|
|
|   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|   | . |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|
|   | . | . |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |   |
Template Sequence |   |
V | T | G | I | A | F | D | K | N | Q | A | R | I | N | V | R | . |
. |
G | V | P | D | K | P | G | V | A | Y | Q | I | L | G | A | V | A | D | A | N | I | E | V | D | X | I | I | Q | N | G | T | T | D | F | S | F | T | V | P | R | G | D | Y | K | Q | T | L | E | I | L | S | E | . |
. |
. |
R | Q | D | S | I | G | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . |  |  |  |
|
| T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  | . | . | . | S | S | T | T | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
|
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | |
|
|
. | . | . | . | . | . | . |
  |
  |   |
378 | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | R | V | E | V | E | E | G | L | A | L | V | A | L | I | G | N | D | L | S | K | A | C | G | V | G | K | E | V | F | G | V | L | E | P | F | N | I | R | M | I | C | Y | G | A | S | S | H | N | L | C | F | L | V | P | G | E | D | A | E | Q | V | V | Q | K | L | H | S | N | L | F |
Query Conservation |   |
  |   |
|   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|
|   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |
Template Sequence |   |
A | S | I | D | G | D | D | T | V | C | K | V | S | A | V | G | L | G | X | R | S | H | V | G | V | A | A | K | I | F | R | T | L | A | E | E | G | I | N | I | Q | X | I | S | T | S | E | I | K | V | S | V | L | I | D | E | K | Y | X | E | L | A | T | R | V | L | H | K | A | F | N |
Template Known Secondary structure |   |
S |  |  |  |  |  | S | S |  |  |  |  |  |  |  |
| S | S |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |
| S | S |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
333 | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|