Job Description P08660 Confidence 99.91% Date Thu Jan 5 11:01:34 GMT 2012 Rank 36 Aligned Residues 192 % Identity 23% Template c2j4kC_ PDB info PDB header:transferase Chain: C: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of uridylate kinase from sulfolobus2 solfataricus in complex with ump to 2.2 angstrom3 resolution Resolution 2.2 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																					.	.											.	.
Query SS confidence																					.	.											.	.
Query Sequence		M	S	E	I	V	V	S	K	F	G	G	T	S	V	A	D	F	D	A	.	.	M	N	R	S	A	D	I	V	L	S	.	.	D	A	N	V	R	L	V	V	L	S	A	S	A	G	I	T	N	L	L	V	A	L	A	E	G	L	E	P	G	E	R	F	E	K	L	D	A	I	R	N	I	Q	F	A	I	L	E
Query Conservation																					.	.											.	.
Alig confidence				.	.																.	.											.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	.	.	I	I	L	K	I	S	G	K	F	F	D	E	D	N	V	D	N	L	I	V	L	R	Q	S	I	K	E	L	A	D	N	G	F	R	V	G	I	V	T	G	G	G	S	T	A	R	R	Y	I	K	L	A	R	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.							G	G	G	G	T	T	T																		T	T																							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	Y	P	N	V	I	R	E	E	I	E	R	L	L	E	N	I	T	V	L	A	E	A	A	A	L	A	T	S	P	A	L	T	D	E	L	V	S	H	G	E	L	M	S	T	L	L	F	V	E	I	L	R	E	R	D	V	Q	A	Q	W	F	D	V	R	K	V	M	R	T	N	D	R	F	G	R	A	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	G	E	A	Y	L	D	L	L	G	I	W	A	S	R	L	N	A	Y	L	V	M	F	S	L	Q	D	L	A	Y	M	H	V	P	Q	S	L	E	E	F	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																								T	T	T	T	T	B		S				S	S						.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
																														58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	I	A	A	L	A	E	L	A	A	L	Q	L	L	P	R	L	N	E	G	L	V	I	T	Q	G	F	I	G	S	E	N	K	G	R	T	T	T	L	G	R	G	G	S	D	Y	T	A	A	L	L	A	E	A	L	H	A	S	R	V	D	I	W	T	D	V	P	G	I	Y	T	T	D	P	R	V	V	S	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	W	S	H	G	K	V	V	V	T	G	G	F	Q	P	.	.	.	.	.	.	.	.	.	.	.	G	Q	S	T	A	A	V	A	A	L	V	A	E	A	S	S	S	K	T	L	V	V	A	T	N	V	D	G	V	Y	E	K	D	P	R	I	Y	I	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S	S	B							S	T	.	.	.	.	.	.	.	.	.	.	.	T	S													T	T		S							S	S					S	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.										.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.
Query Sequence		A	K	R	I	D	E	I	A	F	A	E	A	A	E	M	A	T	F	G	A	K	V	L	H	P	A	T	L	L	P	A	V	R	S	D	I	P	V	F	V	G	S	S	K	D	P	.	.	.	.	.	.	.	.	.	R	A	G	G	T	L	V	C	N
Query Conservation																																																.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	L	R	L	L	D	P	L	A	I	K	I	V	E	R	S	K	I	R	V	I	V	M	N	Y	R	K	L	N	R	I	I	D	I	L	K	G	E	E	V	S	S	I	I	E	P
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T								G	G	G	G	G	G							T		S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.														.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions