Job Description P08660 Confidence 99.96% Date Thu Jan 5 11:01:34 GMT 2012 Rank 10 Aligned Residues 279 % Identity 20% Template c2e9yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbamate kinase; PDBTitle: crystal structure of project ape1968 from aeropyrum pernix k1 Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.											.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.													.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.													.	.	.
Query Sequence		E	I	V	V	S	K	F	G	G	T	S	V	A	D	F	.	.	.	.	.	.	.	.	.	.	D	A	M	N	R	S	A	D	I	V	L	S	.	.	.	D	A	N	V	R	L	V	V	L	S	A	S	A	G	I	T	N	L	L	V	A	L	A	E	G	L	E	P	G	E	R	F	E	K	L	D	A	I	R	N
Query Conservation																	.	.	.	.	.	.	.	.	.	.													.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.													.	.	.																																		.
Template Conservation																																																																											.
Template Sequence		R	L	A	V	I	A	L	G	G	N	A	I	A	G	P	G	M	D	V	S	V	E	S	Q	T	A	A	V	K	R	A	S	S	I	I	A	D	V	L	A	D	G	W	R	S	V	I	T	H	G	N	G	P	Q	V	G	Y	L	S	E	A	F	E	A	L	P	P	E	R	P	R	Q	P	.	L	Y	I	A	T	A
Template Known Secondary structure														S	B	T	T	T	B																							T	T																						T	S		T	T	S					.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		I	Q	F	A	I	L	E	R	L	R	Y	P	N	V	I	R	E	E	I	E	R	L	L	E	N	I	.	.	T	V	L	A	E	A	A	A	L	A	T	S	P	A	L	T	D	E	L	V	S	H	G	E	L	M	S	T	L	L	F	V	E	I	L	R	E	R	D	V	Q	A	Q	W	F	D	V	R	K	V	M	R
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		M	T	Q	A	W	I	G	L	L	L	K	H	S	L	E	E	E	L	R	R	R	G	L	N	V	L	V	P	V	V	I	S	R	V	L	V	D	V	S	D	P	S	F	N	N	P	S	K	P	V	G	P	I	Y	G	R	E	E	A	E	E	L	S	R	R	Y	G	W	V	F	K	R	D	P	R	G	G	F	R	R
Template Known Secondary structure																						T	T																T	T		G	G	G	T	S																													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		148	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure									.																																		.	.	.	.	.
Query SS confidence									.																																		.	.	.	.	.
Query Sequence		T	N	D	R	F	G	R	.	A	E	P	D	I	A	A	L	A	E	L	A	A	L	Q	L	L	P	R	L	N	E	G	L	V	I	T	Q	G	F	I	G	S	.	.	.	.	.	E	N	K	G	R	T	T	T	L	G	R	G	G	S	D	Y	T	A	A	L	L	A	E	A	L	H	A	S	R	V	D	I	W	T
Query Conservation									.																																		.	.	.	.	.
Alig confidence									.															.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		V	V	P	S	P	R	P	V	S	I	V	D	R	D	L	I	A	E	A	S	A	E	.	.	.	.	.	.	.	S	P	A	V	V	A	L	G	G	G	G	V	P	V	V	E	R	P	G	G	V	L	E	P	V	E	A	V	V	D	K	D	L	A	S	S	L	L	A	T	Q	L	N	A	D	L	L	V	I	L	T
Template Known Secondary structure												T	T											.	.	.	.	.	.	.		S						G	G	G								T	T	S						S																T	T		S
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.								.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.						.	.	.	.	.	290
Predicted Secondary structure																																							.	.	.					.	.	.																							.	.	.	.	.
Query SS confidence																																							.	.	.					.	.	.																							.	.	.	.	.
Query Sequence		D	V	P	G	I	Y	T	T	D	P	R	V	V	S	A	A	K	R	I	D	E	I	A	F	A	E	A	A	E	M	A	T	F	G	A	K	V	.	.	.	L	H	P	A	.	.	.	T	L	L	P	A	V	R	S	D	I	P	V	F	V	G	S	S	K	D	P	R	A	.	.	.	.	.	G	G	T	L	V	C
Query Conservation																																							.	.	.					.	.	.																							.	.	.	.	.
Alig confidence													.	.																									.	.	.					.	.	.																							.	.	.	.	.
Template Conservation													.	.
Template Sequence		D	V	P	G	V	A	V	N	Y	G	R	.	.	E	G	E	R	W	L	R	R	A	A	A	S	E	L	K	K	Y	L	R	E	G	H	F	P	P	G	S	M	G	P	K	V	E	A	A	I	S	F	V	E	R	T	G	K	P	A	V	I	G	S	L	E	E	A	R	Q	V	L	S	L	Q	A	G	T	V	V	M
Template Known Secondary structure		S	S	S	S				T	T	T	S	.	.	T	T					S													T	T		S		T	T	T																	S							S	T	T						T	T	S	S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		291
Predicted Secondary structure
Query SS confidence
Query Sequence		N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		315

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions