Job Description P08660 Confidence 100.00% Date Thu Jan 5 11:01:34 GMT 2012 Rank 2 Aligned Residues 445 % Identity 34% Template c2cdqB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of arabidopsis thaliana aspartate kinase2 complexed with lysine and s-adenosylmethionine Resolution 2.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																.																													.	.	.	.	.
Query SS confidence																																.																													.	.	.	.	.
Query Sequence		M	S	E	I	V	V	S	K	F	G	G	T	S	V	A	D	F	D	A	M	N	R	S	A	D	I	V	L	S	D	.	A	N	V	R	L	V	V	L	S	A	S	A	G	I	T	N	L	L	V	A	L	A	E	G	L	E	P	G	.	.	.	.	.	E	R	F	E	K	L	D	A	I	R	N	I	Q	F	A	I
Query Conservation																																.																													.	.	.	.	.
Alig confidence				.	.																											.																													.	.	.	.	.
Template Conservation				.	.
Template Sequence		I	T	.	.	C	V	M	K	F	G	G	S	S	V	A	S	A	E	R	M	K	E	V	A	D	L	I	L	T	F	P	E	E	S	P	V	I	V	L	S	A	M	G	K	T	T	N	N	L	L	L	A	G	E	K	A	V	S	C	G	V	S	N	A	S	E	I	E	E	L	S	I	I	K	E	L	H	I	R	T
Template Known Secondary structure				.	.							G	G	G	G	S	S															T	T										S	T	T																	G	G	G	S	T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		27	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		L	E	R	L	R	Y	P	N	V	I	R	E	E	I	E	R	L	L	E	N	I	T	V	L	A	E	A	A	A	L	A	T	S	P	A	L	T	D	E	L	V	S	H	G	E	L	M	S	T	L	L	F	V	E	I	L	R	E	R	D	V	Q	A	Q	W	F	D	V	R	K	V	.	M	R	T	N	D	R	F	G
Query Conservation																																																																									.
Alig confidence																														.																																											.
Template Conservation																														.
Template Sequence		V	K	E	L	N	I	D	P	S	V	I	L	T	Y	L	E	E	L	E	Q	L	L	K	G	I	A	M	M	.	K	E	L	T	L	R	T	R	D	Y	L	V	S	F	G	E	C	L	S	T	R	I	F	A	A	Y	L	N	T	I	G	V	K	A	R	Q	Y	D	A	F	E	I	G	F	I	T	T	D	D	F	T
Template Known Secondary structure						T			T																					.	T																													T	T								T	T	T	T	T			B		S		S	T
Template Predicted Secondary structure																														.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																										.												.
Query SS confidence																										.												.
Query Sequence		R	A	E	P	D	I	A	A	L	A	E	L	A	A	L	Q	L	L	P	R	L	N	E	G	.	L	V	I	T	Q	G	F	I	G	S	E	.	N	K	G	R	T	T	T	L	G	R	G	G	S	D	Y	T	A	A	L	L	A	E	A	L	H	A	S	R	V	D	I	W	T	D	V	P	G	I	Y	T	T	D	P
Query Conservation																										.												.
Alig confidence																										.												.
Template Conservation
Template Sequence		N	G	D	I	L	E	A	T	Y	P	A	V	A	K	R	L	Y	D	D	W	M	H	D	P	A	V	P	I	V	T	G	F	L	G	K	G	W	K	T	G	A	V	T	T	L	G	R	G	G	S	D	L	T	A	T	T	I	G	K	A	L	G	L	K	E	I	Q	V	W	K	D	V	D	G	V	L	T	C	D	P
Template Known Secondary structure		T			B		T	T																S								S	S					T	T	T								S	S													T	T		S							S	S	S	S	S	B	S	S		T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		R	V	V	S	A	A	K	R	I	D	E	I	A	F	A	E	A	A	E	M	A	T	F	G	A	K	V	L	H	P	A	T	L	L	P	A	V	R	S	D	I	P	V	F	V	G	S	S	K	D	P	R	A	G	G	T	L	V	C	N	K	.	T	E	N	P	P	L	F	R	A	L	A	L	R	R	N	Q	T	L
Query Conservation																																																															.
Alig confidence																																																															.
Template Conservation
Template Sequence		T	I	Y	K	R	A	T	P	V	P	Y	L	T	F	D	E	A	A	E	L	A	Y	F	G	A	Q	V	L	H	P	Q	S	M	R	P	A	R	E	G	E	I	P	V	R	V	K	N	S	Y	N	P	K	A	P	G	T	I	I	T	K	T	R	D	M	T	K	S	I	L	T	S	I	V	L	K	R	N	V	T	M
Template Known Secondary structure		T	T		T	T			B											T	T	T	T	T	S	S	S				G	G	G	G						T	T								T	T	S	T	T	S							S					T	T		S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		L	T	L	H	S	L	N	M	L	H	S	R	G	F	L	A	E	V	F	G	I	L	A	R	H	N	I	S	V	D	L	I	T	T	S	E	V	S	V	A	L	T	L	D	T	T	G	S	T	S	T	G	D	T	L	.	L	T	Q	S	L	L	M	E	L	S	A	L	C	R	V	E	V	E	E	G	L	A	L	V
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		L	D	I	A	S	T	R	M	L	G	Q	V	G	F	L	A	K	V	F	S	I	F	E	E	L	G	I	S	V	D	V	V	A	T	S	E	V	S	I	S	L	T	L	D	P	S	K	L	W	S	R	E	L	I	Q	Q	E	L	D	H	V	V	E	E	L	E	K	I	A	V	V	N	L	L	K	G	R	A	I	I
Template Known Secondary structure							G	G	G	T	T		S	S												T	T										S	S									G	G	G	S	S	S															T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410			.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		A	L	I	G	N	D	L	S	K	A	C	G	V	G	K	E	V	F	G	V	L	.	.	E	P	F	N	I	R	M	I	C	Y	G	A	S	S	H	N	L	C	F	L	V	P	G	E	D	A	E	Q	V	V	Q	K	L	H	S	N	L	F	E
Query Conservation																							.	.
Alig confidence						.																	.	.
Template Conservation						.
Template Sequence		S	L	I	G	.	N	V	Q	H	S	S	L	I	L	E	R	A	F	H	V	L	Y	T	K	G	V	N	V	Q	M	I	S	Q	G	A	S	K	V	N	I	S	F	I	V	N	E	A	E	A	E	G	C	V	Q	A	L	H	K	S	F	F	E
Template Known Secondary structure						.		G	G	G																T				S						T	T		S																								S
Template Predicted Secondary structure						.
Template SS confidence
		424	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.