Job Description P08660 Confidence 95.91% Date Thu Jan 5 11:01:34 GMT 2012 Rank 54 Aligned Residues 113 % Identity 14% Template c1u8sB_ PDB info PDB header:transcription Chain: B: PDB Molecule:glycine cleavage system transcriptional PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor Resolution 2.45 Å

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		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	R	N	Q	T	L	L	T	L	H	S	L	N	M	L	H	S	R	G	F	L	A	E	V	F	G	I	L	A	R	H	N	I	S	V	D	L	I	T	T	S	E	V	S	V	A	L	T	L	D	T	T	G	S	T	S	T	G	D	T	L	L	T	Q	S	L	L	M	E	L	S	A	L	C	R	V	E	V	E
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		S	L	T	Q	H	L	V	I	T	A	V	G	T	.	.	.	D	R	P	G	I	C	N	E	V	V	R	L	V	T	Q	A	G	C	N	I	I	D	S	R	I	A	M	F	G	K	E	F	T	L	L	M	L	I	S	G	S	P	S	N	I	T	R	V	E	T	T	L	P	L	L	G	Q	Q	H	D	L	I	T	M
Template Known Secondary structure															.	.	.			T	T											T	T	T												T	T																												T	T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
														384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	G	L	A	L	V	A	L	I	G	N	D	L	S	K	A	C	G	V	G	K	E	V	F	G	V	L	E	P	F	N	I	R	M	I	C	Y	G	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																										.	.	.
Template Sequence		M	K	R	T	S	P	H	D	H	Q	T	H	A	Y	T	V	E	V	Y	V	E	S	D	D	.	.	.	K	L	G	L	T	E	K	F	T	Q	F	F	A	Q	R	Q	I	G	M	A	S	L	S	A
Template Known Secondary structure														S										S		.	.	.		T	T	T											T	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions