Return to main results Retrieve Phyre Job Id

Job DescriptionP22525
Confidence15.42%DateThu Jan 5 11:38:56 GMT 2012
Rank63Aligned Residues27
% Identity26%Templated1pgsa2
SCOP infoNucleoplasmin-like/VP (viral coat and capsid proteins) PHM/PNGase F Glycosyl-asparaginase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   456...460.........470 ....... ..480...
Predicted Secondary structure 







.



...


Query SS confidence 














.






. . .





Query Sequence  RGWNSREAIDPWQVD. WSTITAS. . . NLPFRF
Query Conservation       
  
 
  

.
      ... 


 
Alig confidence 








.




.






...





Template Conservation   




  
.


 

      
  

  
 
Template Sequence  AGWCPGMAV. PTRIDVLNNSLTGSTFSYEYKF
Template Known Secondary structure  SS

TTS

.



GGGTTS
Template Predicted Secondary structure 








.









Template SS confidence 































   249250....... ..260.........270.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions