 |
Job Description | P22525 | Confidence | 12.14% | Date | Thu Jan 5 11:38:56 GMT 2012 |
Rank | 71 | Aligned Residues | 47 |
% Identity | 26% | Template | c3hzrD_ |
PDB info |
PDB header:ligase | Chain: D: PDB Molecule:tryptophanyl-trna synthetase; |
PDBTitle: tryptophanyl-trna synthetase homolog from entamoeba histolytica
|
Resolution | 3.00 Å |
|
  |   |
487 | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | |
. | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | |
. | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | P | R | N | S | L | G | R | Y | K | F | N | M | P | S | . |
S | E | A | I | Y | L | H | D | T | P | N | H | N | L | F | K | R | D | T | R | . |
A | L | S | S | G | C | V | R | V | N | K | A | S | D | L |
Query Conservation |   |
|
|   |   |
|
|
|
|   |
|
|
|   |
|
|
| . |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |   |
| . |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
| . |
| . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   | . |   | . | . |
|
|
|
|
|   |   |   |
|   |
|   |
|   |
|
|
|
|   |
| . |   |   |
|
|   |
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
P | L | L | S | G | V | . |
T | . |
. |
K | F | D | I | P | S | D | H | N | S | I | L | L | S | D | N | A | K | Q | V | . |
E | R | K | I | N | K | L | A | F | S | G | G | R | N | T | T | E | E | H | K | K | L |
Template Known Secondary structure |   |
|
| T | T |
| T | . | T | . | . |
|
| S |
|
|
| T | T | T | S |
| B | T | T |
|
|  |  |  |  | . |  |  |  |  |  |  | T | S |
|
|
|
|
| S | S |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
| . |
| . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
257 | . | . | 260 | . | . | |
. | |
|
. | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | |
. | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|