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Job DescriptionP22525
Confidence99.14%DateThu Jan 5 11:38:56 GMT 2012
Rank6Aligned Residues84
% Identity29%Templatec3bkhA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:lytic transglycosylase; PDBTitle: crystal structure of the bacteriophage phikz lytic2 transglycosylase, gp144
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNE
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Template Sequence  KVLRKGDRGDEVCQLQTLLNLCGYD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VGKPDGIFGNN
Template Known Secondary structure 

B
TT
BSTTT

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S

SB

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   2.......10.........20...... ...30.......
 
   321........330.........340......... 350.........360........
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Query Sequence  LVEAVKRFQAWQGLGADGAIGPATRDWLN. . . . . . . . . . . . . VTPAQRAGVLALNIQRLRL
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Template Sequence  TFNQVVKFQKDNCLDSDGIVGKNTWAELFSKYSPPIPYKTIPXPTANKSRAAATPVXNAVE
Template Known Secondary structure  TTS

SS
B



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   38.40.........50.........60.........70.........80.........90........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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