 |
Job Description | P22525 | Confidence | 16.41% | Date | Thu Jan 5 11:38:56 GMT 2012 |
Rank | 56 | Aligned Residues | 63 |
% Identity | 21% | Template | c2xvsA_ |
PDB info |
PDB header:antitumor protein | Chain: A: PDB Molecule:tetratricopeptide repeat protein 5; |
PDBTitle: crystal structure of human ttc5 (strap) c-terminal ob2 domain
|
Resolution | 1.80 Å |
|
 |
  |   |
475 | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | A | S | N | L | P | F | R | F | Q | Q | A | P | G | P | R | N | S | L | G | R | Y | K | F | N | M | P | S | S | E | A | I | Y | L | H | D | T | P | N | . |
. |
. |
. |
. |
. |
. |
H | N | L | F | K | R | D | T | R | A | L | S | S | G | C | V | R | V | N | K | A | S | D | L |
Query Conservation |   |
  |   |   |   |
|
|
|   |
|
|
|   |
|
|   |   |
|
|
|
|   |
|
|
|   |
|
|
|   |   |   |
|
|
|
|
|
|
|   | . | . | . | . | . | . | . |
|   |
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |
|
|   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |   |
|
|
|
|   |
|
|   |
|
Template Sequence |   |
T | E | E | K | V | P | F | T | F | G | L | V | D | S | D | G | P | C | Y | A | V | M | V | Y | N | I | V | Q | S | W | G | V | L | I | G | D | S | V | A | I | P | E | P | N | L | R | L | H | R | I | Q | H | K | G | K | D | Y | S | F | S | S | V | R | V | E | T | P | L | L | L |
Template Known Secondary structure |   |
| T | T |
|
| S |  |  |  |  |  |  | S | S | S | S |
|
|  |  |  |  |  |
|
|
|
| S | S |
|
|
|
| T | T |
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | S |
| G | G | G |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
347 | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|