Job Description P22525 Confidence 99.17% Date Thu Jan 5 11:38:56 GMT 2012 Rank 4 Aligned Residues 104 % Identity 29% Template c1y7mB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein bsu14040; PDBTitle: crystal structure of the b. subtilis ykud protein at 2 a2 resolution Resolution 2.05 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P	T	E	L	S	T	G	I	M	V	N	I	P	A	Y	S	L	V	Y	Y	Q	N	G	N	Q	V	L	D	S	R	V	I	V	G	R	P	D	R	K	T	P	M	M	S	S	A	L	N	N	V	V	V	N	P	P	W	N	V	P	P	T	L	A	R	K	D	I	L	P	K	V	R	N	D	P	G	Y	L
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	P	Y	T	I	P	Y	H	I	A	V	S	I	G	A	K	T	L	T	L	S	L	N	N	R	V	X	K	T	Y	P	I	A	V	G	K	I	L	T	Q	T	P	T	G	E	F	Y	I	I	N	R	Q	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				G	G	G	S								T	T	T	T							T	T									B			B	T	T	B																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	H	G	Y	T	V	M	R	G	W	N	S	R	E	A	I	D	P	W	Q	V	D	W	S	T	I	T	A	S	N	L	P	F	R	F	Q	Q	A	P	G	P	R	N	S	L	G	R	Y	K	F	N	M	P	S	S	E	A	I	Y	L	H	D	T	P	N	H	N	L	F	K	R	D	T	R	A	L	S	S	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.															.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	G	P	F	G	A	Y	W	L	S	L	S	A	A	.	H	Y	G	I	H	G	T	N	N	P	A	S	I	G	.	.	.	K	A	V	S	K	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	T	T						S	S	T	.	T							S		G	G	G	T	T	.	.	.	S				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.															.	.	.
Template SS confidence
																																											104	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.
		528	.	530	.			.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		C	V	R	V	.	.	N	K	A	S	D	L	A	N	M	L
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		C	I	R	X	H	N	K	D	V	I	E	L	A	S	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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