Job Description P22525 Confidence 97.32% Date Thu Jan 5 11:38:56 GMT 2012 Rank 9 Aligned Residues 101 % Identity 26% Template c1l6jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:matrix metalloproteinase-9; PDBTitle: crystal structure of human matrix metalloproteinase mmp92 (gelatinase b). Resolution 2.50 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		P	G	Q	W	S	N	D	V	P	A	L	R	E	I	.	.	.	L	Q	R	T	G	M	L	D	G	G	P	K	I	T	L	P	G	D	D	T	P	T	D	A	V	V	S	P	S	A	V	T	V	E	T	A	E	T	K	P	M	D	K	Q	T	T	S	R	S	K	P	A	P	A	V	R	A	A	Y	D	N	E	L
Query Conservation																.	.	.
Alig confidence																.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	D	L	R	T	N	L	T	D	R	Q	L	A	E	E	Y	L	Y	R	Y	G	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure		T	T																			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																																																								.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		V	E	A	V	K	R	F	Q	A	W	Q	G	L	G	A	D	G	A	I	G	P	A	T	R	D	W	L	N	V	T	P	A	Q	R	A	G	V	L	A	L	N	I	Q	R	L	R	L	.	L	P	T	E	L	S	T	G	I	M	V	N	I	P	A	Y	S	L	V	Y	Y	Q	N	G	N	Q	V	L	D	S	R	V
Query Conservation																																																	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	A	L	L	L	L	Q	K	Q	L	S	L	P	E	T	G	E	L	D	S	A	T	L	K	A	M	R	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	C	G	V	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	R	F	Q	T
Template Known Secondary structure													T					S	S										T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																.	.	100	.	.	.																								.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	R	P	D	R	K	T	P	M	M	S	S	A	L	N	N	V	V	V	N	P	P	W	N	V	P	P	T	L	A	R	K	D	I	L	P	K	V	R	N
Query Conservation
Alig confidence										.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		F	E	G	D	L	K	W	H	.	.	.	.	H	H	N	I	T	Y	W	I	Q	N	Y	S	E	D	L	P	R	A	V	I	D	D	A	F	A	R	A	F	A	L
Template Known Secondary structure			S	S		S	S			.	.	.	.	S	S											T	T	S
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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