Job Description P0ADH5 Confidence 29.20% Date Thu Jan 5 11:21:00 GMT 2012 Rank 25 Aligned Residues 128 % Identity 20% Template d1a41a_ SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Eukaryotic DNA topoisomerase I, catalytic core Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		C	L	T	L	L	C	F	I	H	G	F	R	A	S	E	.	.	.	I	C	R	L	R	I	S	D	I	D	L	K	A	K	C	I	Y	I	H	R	L	K	K	G	F	S	T	T	H	P	L	L	N	K	E	V	Q	A	L	K	N	W	L	S	I	R	T	S	Y	P	H	A	E	S	E	W	V	F	L	S	R	K
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																																									.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		A	V	F	M	L	M	E	T	M	F	F	K	E	N	E	T	V	G	L	L	T	L	K	N	K	H	I	E	I	S	P	D	E	I	V	I	K	F	V	G	K	D	K	V	S	H	E	F	V	V	H	K	S	N	R	L	Y	K	P	L	L	K	L	T	D	D	S	S	P	E	E	F	L	F	.	.	.	.	.	.
Template Known Secondary structure																						T		B	G	G	G					T	T									T	T	T									T	T	S	S	S										T	T		T	T	S	B	S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	P	L	S	R	Q	Q	F	Y	H	I	I	S	T	S	G	G	N	A	G	L	S	L	E	I	H	P	H	M	L	R	H	S	C	G	F	A	L	A	N	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	T	R	L	I	Q	D	Y	L	G	H	R	N	I	R	H	T
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.														.	.	.	.	.	.	.	.
Template Sequence		.	N	K	L	S	E	R	K	V	Y	E	C	I	K	.	.	.	.	.	.	.	.	Q	F	G	I	R	I	K	D	L	R	T	Y	G	V	N	Y	T	F	L	Y	N	F	W	T	N	V	K	S	I	S	P	L	P	S	P	K	K	L	I	A	L	T	I	K	Q	T	A	E	V	V	G	H	T	P	S	I	S	K
Template Known Secondary structure		.	T	T												.	.	.	.	.	.	.	.		T	T																										S	S	S																				S	S
Template Predicted Secondary structure		.														.	.	.	.	.	.	.	.
Template SS confidence
			201	.	.	.	.	.	.	.	.	210	.	.	.									.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		174	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	Y	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	Y	M	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions