Job Description P77748 Confidence 100.00% Date Thu Jan 5 12:32:29 GMT 2012 Rank 23 Aligned Residues 178 % Identity 24% Template d2i0ka2 SCOP info FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like FAD-linked oxidases, N-terminal domain Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.		.
Predicted Secondary structure																																																												.	.	.	.	.	.	.														.
Query SS confidence																																																												.	.	.	.	.	.	.														.
Query Sequence		M	S	T	D	N	S	I	Y	Q	L	L	P	D	A	V	V	F	P	R	S	T	A	D	V	A	L	I	A	R	L	A	A	Q	E	R	Y	S	S	L	I	F	T	P	R	G	G	G	T	G	T	N	G	Q	A	L	N	Q	G	.	.	.	.	.	.	.	I	I	V	D	M	S	R	H	M	N	R	I	I	.	E
Query Conservation																																																												.	.	.	.	.	.	.														.
Alig confidence																																				.	.	.																						.	.	.	.	.	.	.								.						.
Template Conservation																																				.	.	.																																				.
Template Sequence		Y	Q	N	W	S	K	E	I	M	L	D	A	T	W	V	C	S	P	K	T	P	Q	D	V	V	R	L	A	N	W	A	H	E	H	.	.	.	D	Y	K	I	R	P	R	G	A	M	A	G	W	T	P	L	T	V	E	K	G	A	N	V	E	K	V	I	L	A	D	T	M	T	H	.	L	N	G	I	T	V	N
Template Known Secondary structure					T	T	S	S	S											S	S															.	.	.	T														T	T	S	S		T	T				T	T							T	T	T	.	S
Template Predicted Secondary structure																																				.	.	.																																				.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.											.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	P	E	E	G	W	V	R	V	E	A	G	V	I	K	D	Q	L	N	Q	Y	L	K	P	F	G	Y	F	F	A	P	E	L	S	T	S	N	R	A	T	L	G	G	M	I	N	T	D	A	S	G	.	.	.	.	.	.	.	.	.	.	Q	G	S	L	V	Y	G	K	T	S	D	H	V	L	G	V	R	A
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		T	G	G	P	V	A	T	V	T	A	G	A	G	A	S	I	E	A	I	V	T	E	L	Q	K	H	D	L	G	W	A	N	L	P	A	P	G	V	L	.	S	I	G	G	A	L	A	V	N	A	H	G	A	A	L	P	A	V	G	Q	T	T	L	P	G	H	T	Y	G	S	L	S	N	L	V	T	E	L	T	A
Template Known Secondary structure				S	S	S							T	T	S	B											T	T				S	S			S		T	T		.	B							T	T				S					T	T					T	T			S	S		G	G	G	G
Template Predicted Secondary structure																																									.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	G	G	D	I	L	D	T	Q	P	L	P	V	E	L	A	E	T	L	G	K	S	N	T	T	I	G	R	I	Y	N	T	V	Y	Q	R	C	R	Q	Q	R	Q	L	I	I	D	N	F	P	K	L	N	R	F	L	T	G	Y	D	L	R	H	V	F	N	D	E	M	T	E	F	D	L	T	R	I	L	T
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	W	N	G	T	T	Y	A	L	E	T	Y	Q	R	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	I	T	P	L	L	T
Template Known Secondary structure						S	S	S								T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G					S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																																																								.	250	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	E	G	T	L	A	F	I	T	E	A	R	L	D	I	T	R
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		N	L	G	.	.	R	C	F	L	T	S	V	T	M	Q	A	G	P
Template Known Secondary structure			T	T	.	.	S	S
Template Predicted Secondary structure					.	.
Template SS confidence
		257	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions