Job Description P77748 Confidence 99.96% Date Thu Jan 5 12:32:29 GMT 2012 Rank 28 Aligned Residues 246 % Identity 15% Template d1wvfa1 SCOP info Ferredoxin-like FAD-linked oxidases, C-terminal domain Vanillyl-alcohol oxidase-like Resolution 1.30

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		283	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.										.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																	.	.																																	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																	.	.																																	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	R	R	L	V	N	V	K	Y	D	.	.	.	S	F	D	S	A	L	R	N	A	P	F	M	V	E	A	R	.	.	A	L	S	V	E	T	V	D	S	K	V	L	N	L	A	R	E	D	I	V	W	H	S	V	S	E	L	I	T	D	V	P	.	.	.	.	.	.	.	.	.	D	Q	E	M	L	G	L
Query Conservation													.	.	.																	.	.																																	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	F	K	P	F	E	V	I	F	E	D	E	A	D	I	V	E	I	V	D	A	L	R	P	L	R	M	S	N	T	I	P	N	S	V	V	I	A	S	T	L	W	E	A	G	S	A	H	L	T	R	A	Q	Y	T	T	E	P	G	H	T	P	D	S	V	I	K	Q	M	Q	K	D	T	G	M	G	A	W	N
Template Known Secondary structure														G	G	G														T	T	S	S		S														T	T			G	G	G	T				S	S	S																	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.								.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		N	I	V	E	F	A	G	D	D	E	A	L	I	D	E	R	V	N	A	L	C	A	R	L	D	E	L	I	A	S	H	Q	A	G	V	I	G	W	Q	V	C	R	E	L	A	G	V	E	R	I	Y	A	M	R	K	K	A	V	G	L	.	.	.	.	.	.	.	L	G	N	A	K	G	A	A	K	P	I	P	F
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence									.																			.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation									.																			.	.	.	.	.	.
Template Sequence		L	Y	A	A	L	Y	G	.	T	Q	E	Q	V	D	V	N	W	K	I	V	T	D	V	F	K	K	.	.	.	.	.	.	L	G	K	G	R	I	V	T	Q	E	E	A	G	D	T	Q	P	F	K	Y	R	A	Q	L	M	S	G	V	P	N	L	Q	E	F	G	L	Y	N	W	R	G	G	G	G	S	M	W	F
Template Known Secondary structure									.	S																		.	.	.	.	.	.		T											T	T		T	T									T	T					G	G	G	G	G	G	G	S	S		T
Template Predicted Secondary structure									.																			.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.							.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.			.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		A	E	D	T	C	V	P	P	E	H	L	A	D	Y	I	A	E	F	R	A	L	L	D	S	H	G	L	S	Y	G	M	F	G	H	V	D	A	G	V	L	H	V	R	.	.	P	A	L	D	M	C	D	P	Q	Q	E	I	L	M	K	Q	I	S	D	D	V	V	A	L	T	A	K	Y	G	G	L	L	W	G	E
Query Conservation																																													.	.
Alig confidence																																													.	.																														.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		A	P	V	S	E	A	R	G	S	E	C	K	K	Q	A	A	M	A	K	R	V	L	H	K	Y	G	L	D	Y	V	A	E	F	I	V	A	P	R	D	M	H	H	V	I	D	V	L	Y	D	R	T	N	P	E	E	T	K	R	A	D	A	C	F	N	E	L	L	D	E	F	E	K	E	G	.	.	.	Y	A	V
Template Known Secondary structure			B				S																			T	T											S	S												T	T																						T	T	.	.	.			B
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.				470	.	.
		500	.	.	.	.		.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		H	G	K	G	F	.	R	A	E	Y	S	P	A	F	F	G	E	E	L	F	A	E	L	R	K	V	K	A	A	F	D	P	H	N	R	L	N	P	G	K
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		Y	R	V	N	T	R	F	Q	D	R	V	A	Q	S	Y	G	P	V	K	R	K	L	E	H	A	I	K	R	A	V	D	P	N	N	I	L	A	P	G	R
Template Known Secondary structure		S				G	G	G								T																	T	T			S		T	T	G
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions