Job Description P77748 Confidence 100.00% Date Thu Jan 5 12:32:29 GMT 2012 Rank 19 Aligned Residues 248 % Identity 22% Template d1e8ga2 SCOP info FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like FAD-linked oxidases, N-terminal domain Resolution 2.1

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.									.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.
Query Sequence		P	Q	I	S	Q	A	P	G	V	V	Q	L	V	L	N	F	L	Q	E	L	E	Q	Q	G	F	T	G	D	T	A	T	S	Y	A	D	R	L	T	M	S	T	D	N	S	I	.	.	.	.	.	.	.	.	Y	Q	L	L	P	D	A	V	V	F	P	R	S	T	A	D	V	A	L	I	A	R	L	A	A	Q	E
Query Conservation																																															.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	T	L	P	P	K	L	S	L	S	D	F	N	E	F	I	Q	D	I	I	R	I	V	G	S	E	N	V	E	V	I	S	V	D	G	S	Y	M	K	P	T	H	T	H	D	P	T	H	V	M	D	Q	D	Y	F	L	A	S	A	I	V	A	P	R	N	V	A	D	V	Q	S	I	V	G	L	A	N	K	F
Template Known Secondary structure			S	S			T	T																			G	G	G								B		S	S	S	B		S	S	S		S	S			S		T	T	S	S			S						S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		R	Y	S	S	L	I	F	T	P	R	G	G	G	T	G	T	N	G	Q	A	.	.	.	.	L	N	Q	G	I	I	V	D	M	S	R	H	M	N	R	I	I	E	I	N	P	E	E	G	W	V	R	V	E	A	G	V	I	K	D	Q	L	N	Q	Y	L	K	P	F	G	Y	F	F	A	P	E	L	S	T	S	N
Query Conservation																						.	.	.	.
Alig confidence		.	.	.																		.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	S	F	P	L	W	P	I	S	I	G	R	N	S	G	Y	G	G	A	A	P	R	V	S	G	S	V	V	L	D	M	G	K	N	M	N	R	V	L	E	V	N	V	E	G	A	Y	C	V	V	E	P	G	V	T	Y	H	D	L	H	N	Y	L	E	A	N	N	L	R	D	K	L	W	L	D	V	P	D
Template Known Secondary structure		.	.	.	T							S	S				T	T	T	T	T	T			S	S	T	T							T	T	T									T	T	T	T						T	T		B											T	T		T	T	T							S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	T	L	G	G	M	I	N	T	D	A	S	G	Q	G	S	L	V	Y	G	K	T	S	D	H	V	L	G	V	R	A	V	L	L	G	G	D	I	L	D	T	Q	P	L	P	V	E	L	A	E	T	L	G	K	S	N	T	T	I	G	R	I	Y	N	T	V	Y	Q	R	C	R	Q	Q	R	Q	L	I	I	D
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	G	G	S	V	L	G	N	A	V	E	R	G	V	G	Y	T	P	Y	G	D	H	W	M	M	H	S	G	M	E	V	V	L	A	N	G	E	L	L	R	T	G	M	G	A	L	P	D	P	K	R	P	E	T	M	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	E	D	Q	P	W	S
Template Known Secondary structure		S	T	T	S	B							T	T		B		S	S	T	T		B	T	G	G	G									T	T	S						G	G	G	G	S						G	G	G	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.															.	230	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	P	K	L	N	R	F	L	T	G	Y	D	L	R	H	V	F	N	D	E	M	T	E	F	D	L	T	R	I	L	T	G	S	E	G	T	L	A	F	I	T	E	A	R	L	D	I	T	R	L	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	H	L	F	P	Y	G	F	G	P	Y	I	D	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	Q	S	N	M	G	I	V	T	K	I	G	I	W	L	M	P	N	P
Template Known Secondary structure		T	T	T	T	T		S			S	S				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S	S	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions