Job Description P77748 Confidence 21.52% Date Thu Jan 5 12:32:29 GMT 2012 Rank 196 Aligned Residues 59 % Identity 17% Template c3nnhA_ PDB info PDB header:rna binding protein/rna Chain: A: PDB Molecule:cugbp elav-like family member 1; PDBTitle: crystal structure of the cugbp1 rrm1 with guuguuuuguuu rna Resolution 2.75 Å

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		F	N	D	E	M	T	E	F	D	L	T	R	I	L	T	G	S	E	G	T	L	A	F	I	T	E	A	R	L	D	I	T	R	L	P	.	.	.	K	V	R	R	L	V	N	V	K	Y	D	S	F	D	S	A	L	R	N	A	P	F	M	V	E	A	R	A
Query Conservation																																					.	.	.
Alig confidence																.	.	.	.																		.	.	.
Template Conservation																.	.	.	.
Template Sequence		V	P	R	T	W	S	E	K	D	L	R	E	L	F	.	.	.	.	E	Q	Y	G	A	V	Y	E	I	N	V	L	R	D	R	S	Q	N	P	P	Q	S	K	G	C	C	F	V	T	F	Y	T	R	K	A	A	L	E	A	Q	N	A	L	H	N	M	K	V
Template Known Secondary structure				T	T											.	.	.	.	T	T	T	S											T	T	S	S	S												S													T	T	T
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions