Job Description P77748 Confidence 41.49% Date Thu Jan 5 12:32:29 GMT 2012 Rank 147 Aligned Residues 91 % Identity 13% Template c3komB_ PDB info PDB header:transferase Chain: B: PDB Molecule:transketolase; PDBTitle: crystal structure of apo transketolase from francisella tularensis Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	N	S	I	Y	Q	L	L	P	D	A	.	V	V	F	P	R	S	T	A	D	V	A	L	I	A	R	L	A	A	Q	E	R	Y	S	S	L	I	F	T	P	R	G	G	G	T	G	T	N	G	Q	A	L	N	Q	G	I	I	V	D	M	S	R	H	M	N	R	I	I	E	I	N	P	E	E	G	W	V	R	V
Query Conservation													.
Alig confidence													.																						.	.																													.
Template Conservation																																			.	.																													.
Template Sequence		H	V	P	S	L	R	L	I	P	N	L	S	V	W	R	P	A	D	T	I	E	T	X	I	A	W	K	E	A	V	K	S	K	.	.	D	T	P	S	V	X	V	L	T	R	Q	N	L	X	P	V	V	Q	T	Q	H	Q	V	A	N	I	A	R	.	G	G	Y	L	V	K	D	N	P	D	A	K	L	T	I	V
Template Known Secondary structure								T	S	T	T								S															S	.	.	S									S	S		B														T	T	.	T								T	T
Template Predicted Secondary structure																																			.	.																													.
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.			.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G	V	I	K	D	Q	L	N	Q	Y	L	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	G	S	E	V	E	L	A	V	K	V	A	N	E
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions