Job Description P77748 Confidence 99.23% Date Thu Jan 5 12:32:29 GMT 2012 Rank 38 Aligned Residues 219 % Identity 12% Template c3cf4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex Resolution 2.00 Å

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		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	P	I	A	V	R	Q	Q	W	R	G	A	M	E	C	N	G	N	G	L	C	F	N	F	D	A	R	S	P	M	C	P	S	M	K	I	T	Q	N	R	I	H	S	P	K	G	R	A	T	L	V	R	E	W	L	R	L	L	A	D	R	G	V	D	P	L	K	L	E	Q	E	L	P	E	S	G	V	S	L
Query Conservation
Alig confidence																								.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	L	P	T	D	E	E	L	V	N	M	V	A	K	C	A	D	C	G	A	C	.	.	.	.	.	.	L	L	A	C	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	D	I	P	E	A	M	G	F	A	K	K	G	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S																				.	.	.	.	.	.					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.							.	.	.	.	.	.														430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.								.	.	.	710	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.
Query Sequence		R	T	L	I	A	R	T	R	N	S	W	H	A	N	K	G	E	Y	D	F	S	H	E	V	K	E	A	M	S	G	C	L	A	C	K	A	C	S	T	Q	C	P	I	K	I	D	V	P	E	F	R	S	R	F	L	Q	L	Y	H	T	R	Y	L	R	.	.	.	.	.	.	.	P	L	R	D	H	L	V	A	T
Query Conservation																																																																		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	F	E	E	I	H	D	T	C	I	G	C	R	R	C	E	Q	V	C	K	K	E	I	P	I	L	N	V	I	E	K	I	A	Q	K	Q	I	A	E	E	K	G	L	M	R	A	G	R	G	Q	V	S	D	A	E	I	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T												T						T											S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		716	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	S	Y	A	P	L	M	A	R	A	P	K	T	F	N	F	F	I	N	Q	P	L	V	R	K	L	S	E	K	H	I	G	M	V	D	L	P	L	L	S	V	P	S	L	Q	Q	Q	M	V	G	H	R	S	A	N	M	T	L	E	Q	L	E	S	L	N	A	E	Q	K	A	R	T	V	L	V	V	Q	D	P
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	L	N	L	V	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	P	G	I	I	A	I	I	G	C	P	N	Y	A	G	G	T	K	D	V	Y	Y	I	A	E	E	F	L	K	R	N	F	I	V	V	T	T	G	C	G	A	M	D	I	G	M	F	K	D	A
Template Known Secondary structure									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								S					S	S		S	S												T	T														T	S				T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		505	.	.	.	.	510	.	.																						.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
		796	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.		.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		F	T	S	Y	Y	D	A	Q	V	V	A	D	F	V	R	L	V	E	K	L	G	F	Q	P	V	L	L	P	.	F	S	P	N	G	K	A	Q	H	I	K	G	F	L	N	R	F	A	K	T	A	K	K	T	A	D	F	L	N	R	M	A	K	L	G	M	P	M	V	G	V	D	P	A	L	V
Query Conservation																														.
Alig confidence								.	.	.	.	.	.	.	.															.																																				.	.
Template Conservation								.	.	.	.	.	.	.	.																																																			.	.
Template Sequence		D	G	K	T	L	Y	.	.	.	.	.	.	.	.	E	R	F	P	G	G	F	Q	C	G	G	L	A	N	I	G	S	C	V	S	N	A	H	I	T	G	A	A	E	K	V	A	A	I	F	A	Q	R	T	L	E	G	N	L	A	E	I	G	D	Y	.	.	I	L	N	R	V	G	A	C	G
Template Known Secondary structure		T	S					.	.	.	.	.	.	.	.			S			S	S	S	T	T							S	G	G	G	G														T	S					T	T									.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																																																			.	.
Template SS confidence
		564	.	.	.	.	.									570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.			620	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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