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Job DescriptionP77748
Confidence100.00%DateThu Jan 5 12:32:29 GMT 2012
Rank16Aligned Residues429
% Identity17%Templatec2y3rC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:taml; PDBTitle: structure of the tirandamycin-bound fad-dependent2 tirandamycin oxidase taml in p21 space group
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90...... ...100.........110
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Query Sequence  TSYADRLTMSTDNSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALN. . QGIIVDMSRHMNRI
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Template Sequence  GDIRYEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVRS. . . GKRVAVRSGGHCYEDFVANSDVRVVMDMSR. LSAV
Template Known Secondary structure  TSTTT

S
TT




S

ST...T

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SSSTTT
TT


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   10.........20.........30.........40.........50. ........60.........70.........80. ....
 
   111........120.........130.........140.........150.........160.........170.........180........
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Query Sequence  IEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGVRAVLLGGD. .
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Template Sequence  . GFDEERGAFAVEAGATLGAVYKTLFRVWGVTLPGGACPD. VGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGD
Template Known Secondary structure  .TTTTTT
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S
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BTT


TT

GGGG
TTS
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   86...90.........100.........110.........120.... .....130.........140.........150.........160...
 
   189190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  . . . . . ILDTQPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTG
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Template Sequence  ARTVIATREPSDPNHDLWWAHTG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G
Template Known Secondary structure  S
TT
TTTTT........................................................S
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   164.....170.........180...... .
 
   264.....270.........280.........290.... .....300.........310.........320.........
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Query Sequence  SEGTLAFITEARLDITRLPKVRRLVNVKYDS. . . . . . . . . . . . . . FDSALRNAPFMVEARALSVETVDSKVLNLAREDIV
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Template Sequence  GGGNFGVVVRYWLRTAEPPEPGRLLPRPPAEVLLNTTVWPWEGLDEAAFARLVRNH. . . . . . . . . . . . GRWFEQNSGPDS
Template Known Secondary structure 
TTSS







GGGTS



SSTT

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STT
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   188.190.........200.........210.........220.........230.........240... ......250.....
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  WHSVSELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCRELAGVERIYAMRKKAVGLL
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Template Sequence  PWCDLYSVLALTRSQSGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSDTRRLP. . . . . . . . WLHSTRWPGIAGD
Template Known Secondary structure  GGGG
GGGS

STTTT
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........TS

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   259260.........270.........280.........290.........300.........310....... ..320.........330
 
   410.........420.........430.........440.........450........ .460.........470....
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Query Sequence  GNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDA. . . . . . . . . . . . . . . GVLHVRPALDMCDPQQ
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Template Sequence  GDMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDDNPAGVVALIAYGGKVNAVPADRTAVAQRDSILKIVYVTTWEDPAQ
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SSS







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GGGGGS
TTSSS



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   331........340.........350.........360.........370.........380.........390.........400.........410
 
   475....480.........490.........500... ......510.........520.........530.....
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Query Sequence  EILMKQISDDVVALTAKYGGLLWGEHGKG. . . . . . . . . . . . . . . . . . . FRAEYSPAFFGEELFAELRKVKAAFDPHNRLN
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Template Sequence  DPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEEWNTSGVPWSELYYKD. AYPRLQAVKARWDPRNVFR
Template Known Secondary structure  TGGGTTS

TTTTB



TTS

GGGG
TTT

SS

GG.G
TT

S
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   412.......420.........430.........440.........450.........460.........470. ........480.........490
 
   536...540....
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Query Sequence  PGKICPPEG
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Template Sequence  HALSVRVPP
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   491........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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