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Job DescriptionP77748
Confidence100.00%DateThu Jan 5 12:32:29 GMT 2012
Rank13Aligned Residues422
% Identity17%Templatec2wdwB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:putative hexose oxidase; PDBTitle: the native crystal structure of the primary hexose oxidase (2 dbv29) in antibiotic a40926 biosynthesis
Resolution3.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.... .....50.........60.........70.........80.........90...... ...100.........
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Query Sequence  TSYADRLTMSTD. NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALN. . QGIIVDMSRHMNR
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Template Sequence  DDPRYLNLKLRGANSRFNGEPDYIHLVGSTQQVADAVEETVRT. . . GKRVAVRSGGHCFEDFVDNPDVKVIIDMSL. LTE
Template Known Secondary structure  TSTTS

S
TT




S
SS...


SS


SSTTSSSTT


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   38.40.........50.........60.........70.........80 .........90.........100.........110 ...
 
   110.........120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  IIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGVRAVLLGGDI
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Template Sequence  I. AYDPSMNAFLIEPGNTLSEVYEKLYLGWNVTIPGGVCGG. VGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQG
Template Known Secondary structure  .TTTT
TT
BS





S
SS.
BTT


TT

GGGS
TTS
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   114 .....120.........130.........140.........150... ......160.........170.........180.........190.
 
   190.. .......200.........210.........220.........230.........240.........250.........260..
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Query Sequence  LDT. . . . . . . QPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILT
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Template Sequence  KARVIVATRERDDPHHDLWWAHTG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
SSTT
TTTTT........................................................
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   192.......200.........210.....
 
   263......270.........280.........290... ......300.........310.........320......
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Query Sequence  GSEGTLAFITEARLDITRLPKVRRLVNVKYD. . . . . . . . . . . . . . . . SFDSALRNAPFMVEARALSVETVDSKVLNLARE
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Template Sequence  GGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAGMTEAAFSRLLRNHG. . . . . . . EWYERNSGPDSPY
Template Known Secondary structure  S
SSSS


SS


S
GGGSS



S
GGG

.......S
STT
GG
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   216...220.........230.........240.........250.........260.........270..... ....280........
 
   327..330.........340.........350.........360.........370.........380.........390.........400......
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Query Sequence  DIVWHSVSELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCRELAGVERIYAMRKKAV
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Template Sequence  TGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDAHIEAVIDGVPPAEVPEPIEQRWLAS. . . . . . . . . . . . . . .
Template Known Secondary structure  GG


TT
SS
STTSTTSTT
TT



TTS
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   289290.........300.........310.........320.........330.........340.........350...
 
   407..410.........420.........430.........440.........450...... ...460.......
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Query Sequence  GLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHV. . . . . . . . . . . . . . . . . . . DAGVLHVRPAL
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Template Sequence  . . . TPGRGGRGPASKTKAGYLRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVNTVDPAATALPQRDAILKVNYIT
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SS

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TTTSS



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S
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   354.....360.........370.........380.........390.........400.........410.........420.........430
 
   468.470.........480.........490.........500... ......510.........520........
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Query Sequence  DMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKG. . . . . . . . . . . . . . . . . . . FRAEYSPAFFGEELFAELRKVKAAF
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Template Sequence  GWANPGNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLADPGLNTSGVPWHDLYYKG. NHPRLRKVKAAY
Template Known Secondary structure  SSGGGTGGGTTS

S
SSB



TTS

GGGTSTTT

SS

TGG.G
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   431........440.........450.........460.........470.........480.........490....... ..500.........
 
   529530.........540..
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Query Sequence  DPHNRLNPGKICPP
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Template Sequence  DPRNHFHHALSIRP
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TT

S

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   510.........520...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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