Job Description P77748 Confidence 100.00% Date Thu Jan 5 12:32:29 GMT 2012 Rank 17 Aligned Residues 394 % Identity 14% Template c2vfvA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:xylitol oxidase; PDBTitle: alditol oxidase from streptomyces coelicolor a3(2): complex2 with sulphite Resolution 1.72 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		T	M	S	T	D	N	S	I	Y	Q	L	L	P	D	A	V	V	F	P	R	S	T	A	D	V	A	L	I	A	R	L	A	A	Q	E	R	Y	S	S	L	I	F	T	P	R	G	G	G	T	G	T	N	G	Q	A	L	N	.	.	Q	G	I	I	V	D	M	S	R	H	M	N	R	I	I	E	I	N	P	E	E
Query Conservation																																																											.	.
Alig confidence																																		.	.	.	.	.	.	.																			.	.										.
Template Conservation																																		.	.	.	.	.	.	.																														.
Template Sequence		T	V	T	N	W	A	G	N	I	T	Y	T	A	K	E	L	L	R	P	H	S	L	D	A	L	R	A	L	V	A	D	S	.	.	.	.	.	.	.	A	R	V	R	V	L	G	S	G	H	S	F	N	E	I	A	E	P	G	D	G	G	V	L	L	S	L	A	G	.	L	P	S	V	V	D	V	D	T	A	A
Template Known Secondary structure				B		S	S	S	S		B		S		S	S		B			S	S												.	.	.	.	.	.	.	S	S					S	S					S	S	T	T				T	T						S	T	T	.	S								T	T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																														.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	V	R	V	E	A	G	V	I	K	D	Q	L	N	Q	Y	L	K	P	F	G	Y	F	F	A	P	E	L	S	T	S	N	R	A	T	L	G	G	M	I	N	T	D	A	S	G	Q	G	S	L	V	Y	G	K	T	S	D	H	V	L	G	V	R	A	V	L	L	G	G	D	I	L	D	T	Q	P	L	P	V
Query Conservation
Alig confidence																																	.																.																														.	.	.
Template Conservation																																	.																.																														.	.	.
Template Sequence		R	T	V	R	V	G	G	G	V	R	Y	A	E	L	A	R	V	V	H	A	R	G	L	A	L	P	N	M	A	S	L	.	P	H	I	S	V	A	G	S	V	A	T	G	T	H	G	.	S	G	V	G	N	G	S	L	A	S	V	V	R	E	V	E	L	V	T	A	D	G	S	T	V	V	I	A	R	.	.	.
Template Known Secondary structure		T						T	T		B											T	T				S				S	S	.	S		S	B								T				.			T	T				G	G	G	G									T	T	S							T	.	.	.
Template Predicted Secondary structure																																	.																.																														.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	E	T	L	G	K	S	N	T	T	I	G	R	I	Y	N	T	V	Y	Q	R	C	R	Q	Q	R	Q	L	I	I	D	N	F	P	K	L	N	R	F	L	T	G	Y	D	L	R	H	V	F	N	D	E	M	T	E	F	D	L	T	R	I	L	T	G	S	E	G	T	L	A	F	I	T	E	A	R	L	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	E	R	F	G	G	A	V	T	S	L	G	A	L	G	V	V	T	S	L	T	L	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	T	T	G	G	G	T	S	S	S	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																										152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	R	L	P	K	V	R	R	L	V	N	V	K	Y	D	S	F	D	S	A	L	R	N	A	P	F	M	V	E	A	R	A	L	S	V	E	T	V	D	S	K	V	L	N	L	A	R	E	D	I	V	W	H	S	V	S	E	L	I	T	D	V	P	D	Q	E	M	L	G	L	N	I	V	E	F	A	G	D	D
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	P	A	Y	E	M	E	Q	H	V	F	T	E	L	P	L	A	G	L	D	P	A	T	F	E	T	V	M	A	A	A	Y	S	V	S	L	F	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	R	A	P	G	F	R	Q	V	W	L	K	R	R	T	D	R
Template Known Secondary structure																		S	T	T											T	S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S	S										T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.																								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	I	D	E	R	V	N	A	L	C	A	R	L	D	E	L	I	A	S	H	Q	A	G	V	I	G	W	Q	V	C	R	E	L	A	G	V	E	R	I	Y	A	M	R	K	K	A	V	G	L	L	G	N	A	K	G	A	A	K	P	I	P	F	A	E	D	T	C	V	P	P	E	H	L	A	D	Y	I	A
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.
Template Sequence		P	L	D	G	F	P	Y	A	A	P	A	A	E	K	M	H	P	V	P	G	M	P	A	V	N	C	T	E	Q	F	G	V	P	G	P	.	.	.	.	.	.	.	.	.	W	H	E	R	L	P	H	F	R	A	E	F	T	P	S	S	G	A	E	L	Q	S	E	Y	L	M	P	R	E	H	A	L	A	A	L	H
Template Known Secondary structure							T	T	S				S	S				S	S	T	T	S		G	G	G	B				T	T					.	.	.	.	.	.	.	.	.	G	G	G	T	S	S	S	B		T	T				S			S										G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.										.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460										.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.
Query Sequence		E	F	R	A	L	L	D	S	H	G	L	S	Y	G	M	F	G	H	V	D	A	G	V	.	.	.	.	.	.	.	.	.	L	H	V	R	P	A	L	D	M	C	D	P	Q	Q	E	I	L	M	K	Q	I	S	D	D	V	V	A	L	T	A	K	Y	G	G	L	L	W	G	E	H	G	K	G	F	R	A	E	Y
Query Conservation																									.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	M	D	A	I	R	E	T	L	A	P	V	L	Q	T	C	E	I	R	T	V	A	A	D	A	Q	W	L	S	P	A	Y	G	R	D	T	V	A	A	H	F	T	W	V	E	D	T	A	A	V	L	P	V	V	R	R	L	E	E	A	L	V	P	F	A	A	R	P	H	W	G	K	V	F	T	V	P	A	G	E
Template Known Secondary structure						T					G	G	G												B		S	T	T		T	T	B	T	S											S																	G	G	G	T					T	T	S
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.		.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		S	P	A	F	F	G	E	E	L	F	A	E	L	R	K	V	K	A	A	F	D	P	H	N	R	L	.	N	P
Query Conservation																												.
Alig confidence							.	.																				.
Template Conservation							.	.
Template Sequence		L	R	A	L	Y	.	.	P	R	L	A	D	F	G	A	L	A	G	A	L	D	P	A	G	K	F	T	N	A
Template Known Secondary structure				T	T		.	.	T	T													T	T		T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		384	.	.	.	.			.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410