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Job DescriptionP77748
Confidence99.72%DateThu Jan 5 12:32:29 GMT 2012
Rank33Aligned Residues169
% Identity17%Templatec2gquA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:udp-n-acetylenolpyruvylglucosamine reductase; PDBTitle: crystal structure of udp-n-acetylenolpyruvylglucosamine2 reductase (murb) from thermus caldophilus
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90...... ...100.........110.........120.........130
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Query Sequence  PDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALN. QGIIVDMSRHMNRIIEINPEEGWVRVEAGVIKDQ
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Template Sequence  PAELWTVETREEL. . . . . . KRAT. . . EAPYRVLGNGSNLLVLDEGVPERVIRLAG. EFQTY. . . . . DLKGWVGAGTLLPL
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G.GGG
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   21........30... .... ..40.........50.........60...... ...70. ........80.....
 
   131........140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  LNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGVRAVLLGGDILDTQPLPVELAETLGKSNTTI
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Template Sequence  LVQEAARAGLS. GLEGLLGIPAQVGGAVKMNAGT. . . . . RFGEMADALEAVEVFHDGAFHVYCP. . . . . . . . . . . . . . . .
Template Known Secondary structure  T.S
GGGTT


BTT
.....TTGGGGTT
G................
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   86...90...... ...100.........110........ .120.........130.........140...
 
   211........220.........230.........240.........250.........260..... ....270.........280.........
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Query Sequence  GRIYNTVYQRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSE. GTLAFITEARLDITRLPKVRRLVN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EELGFGYRKSHLPPGGIVTRVRLKLKERPKE. . . . .
Template Known Secondary structure  ............................................GGS

BTTB



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   144.....150.........160.........170....
 
   290.........300.........310
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Query Sequence  VKYDSFDSALRNAPFMVEARA
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Template Sequence  . . . . EILRRMAEVDRARKGQP
Template Known Secondary structure  ....TTTS
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   175....180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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