Job Description P77748 Confidence 100.00% Date Thu Jan 5 12:32:29 GMT 2012 Rank 7 Aligned Residues 453 % Identity 19% Template c2exrA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cytokinin dehydrogenase 7; PDBTitle: x-ray structure of cytokinin oxidase/dehydrogenase (ckx)2 from arabidopsis thaliana at5g21482 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.
Predicted Secondary structure																						.																																																					.
Query SS confidence																						.																																																					.
Query Sequence		Q	G	F	T	G	D	T	A	T	S	Y	A	D	R	L	T	M	S	T	D	.	N	S	I	Y	Q	L	L	P	D	A	V	V	F	P	R	S	T	A	D	V	A	L	I	A	R	L	A	A	Q	E	R	Y	S	S	L	I	F	T	P	R	G	G	G	T	G	T	N	G	Q	A	L	N	.	Q	G	I	I	V	D
Query Conservation																						.																																																					.
Alig confidence																						.																															.	.																					.
Template Conservation																																																					.	.
Template Sequence		L	N	I	Q	G	E	I	L	C	G	G	A	A	A	D	I	A	G	R	D	F	G	G	X	N	C	V	K	P	L	A	V	V	R	P	V	G	P	E	D	I	A	G	A	V	K	A	A	L	R	S	.	.	D	K	L	T	V	A	A	R	G	N	G	H	S	I	N	G	Q	A	X	A	E	G	G	L	V	V	D
Template Known Secondary structure					S	S					S								T			T	T								S						S	S														S	.	.	S	S							S	S	S			S	S	S	T	T			T	T	S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		103	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		M	S	R	H	M	N	R	I	.	.	.	.	.	.	I	E	I	N	P	E	E	G	W	V	R	V	E	A	G	V	I	K	D	Q	L	N	Q	Y	L	K	P	F	G	Y	F	F	A	P	E	L	S	T	S	N	R	A	T	L	G	G	M	I	N	T	D	A	S	G	Q	G	S	L	V	Y	G	K	T	S	D	H
Query Conservation										.	.	.	.	.	.
Alig confidence					.					.	.	.	.	.	.
Template Conservation					.
Template Sequence		X	S	T	.	T	A	E	N	H	F	E	V	G	Y	L	S	G	G	D	A	T	A	F	V	D	V	S	G	G	A	L	W	E	D	V	L	K	R	C	V	S	E	Y	G	L	A	P	R	S	W	T	D	Y	L	G	L	T	V	G	G	T	L	S	N	A	G	V	S	G	Q	A	F	R	Y	G	P	Q	T	S	N
Template Known Secondary structure		G	G	G	.	G	T	T	S									S	S	S	S	S							T	T		B													S				S				S			S	S	B						T	T					T	T							G	G	G	S
Template Predicted Secondary structure					.
Template SS confidence
		112	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	V	R	A	V	L	L	G	G	D	I	L	D	T	Q	P	L	P	V	E	L	A	E	T	L	G	K	S	N	T	T	I	G	R	I	Y	N	T	V	Y	Q	R	C	R	Q	Q	R	Q	L	I	I	D	N	F	P	K	L	N	R	F	L	T	G	Y	D	L	R	H	V	F	N	D	E	M	T	E	F	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	E	L	D	V	V	T	G	N	G	D	V	V	T	C	S	E	I	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E
Template Known Secondary structure										T	T	S							S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																																																										.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310											.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	R	I	L	T	G	S	E	G	T	L	A	F	I	T	E	A	R	L	D	I	T	R	L	P	K	V	R	R	L	V	N	V	K	Y	D	S	F	D	S	A	L	R	N	A	P	F	M	V	E	A	R	A	.	.	.	.	.	.	.	.	.	.	L	S	V	E	T	V	D	S	K	V	L	N	L	A	R	E
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	F	S	V	L	G	G	L	G	Q	F	G	I	I	T	R	A	R	V	L	L	Q	P	A	P	D	X	V	R	W	I	R	V	V	Y	T	E	F	D	E	F	T	Q	D	A	E	W	L	V	S	Q	K	N	E	S	S	F	D	Y	V	E	G	F	V	F	V	N	G	A	D	P	V	N	G	W	P	T	V	P
Template Known Secondary structure							T	T		T	T	S	S															S										S														T	S		T	T	S	S		S									S	S			T	T	T	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	W	H	S	V	S	E	L	I	T	D	V	P	D	Q	E	M	L	G	L	N	I	V	E	F	A	G	D	D	E	A	L	I	D	E	R	V	N	A	L	C	A	R	L	D	E	L	I	A	S	H	Q	A	G	V	I	G	W	Q	V	C	R	E	L	A	G	V	E	R	I	Y	A	M	R	K	K	A	V
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.
Template Sequence		L	H	P	D	H	E	F	D	P	T	R	L	P	Q	S	C	G	S	V	L	Y	C	L	E	L	G	L	H	Y	R	D	S	D	S	N	S	T	I	D	K	R	V	E	R	L	I	G	R	L	R	F	N	E	G	L	R	F	E	V	D	L	P	Y	V	D	.	.	.	.	.	.	.	F	L	L	R	V	K	R	S
Template Known Secondary structure		S	S	T	T	S				G	G	G	S		T	T			S													T	T	S														T	T					T	T												.	.	.	.	.	.	.			T	T	T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.								.	360	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.																	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		G	L	L	G	N	A	K	G	A	A	K	P	I	P	F	A	E	D	T	C	V	P	P	E	H	L	A	D	Y	I	A	E	F	R	A	L	L	D	S	H	G	L	S	Y	G	M	F	G	H	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	V	L	H	V	R	P	A	L	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		E	E	I	A	K	E	N	G	T	W	E	T	P	H	P	W	L	N	L	F	V	S	K	R	D	I	G	D	F	N	R	T	V	F	K	E	L	V	K	N	G	V	N	G	P	X	L	V	Y	P	L	L	R	S	R	W	D	D	R	T	S	V	V	I	P	E	E	G	E	I	F	Y	I	V	A	L	L	R	F	V
Template Known Secondary structure								T	T		S	S	S																										T	T	T			S	S									G	G	G	S		T	T	S	S					S	S		S
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
			468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	M	C	D	P	Q	Q	E	I	L	M	K	Q	I	S	D	D	V	V	A	L	T	A	K	Y	G	G	L	L	W	G	E	H	G	K	G	F	R	A	E	Y	S	P	A	F	F	G	E	E	L	F	A	E	L	R	K	V	K	A	A	F	D	P	H	N	R	L	N	P	G	K	I	C	P	P	E	G	L
Query Conservation		.
Alig confidence		.																																																	.
Template Conservation																																																			.
Template Sequence		P	P	C	A	K	V	S	S	V	E	K	X	V	A	Q	N	Q	E	I	V	H	W	C	V	K	N	G	I	D	Y	K	L	Y	L	P	H	Y	K	S	Q	E	E	W	I	R	H	F	G	N	.	R	W	S	R	F	V	D	R	K	A	X	F	D	P	X	A	I	L	S	P	G	Q	K	I	F	N	R	S	L
Template Known Secondary structure			T	T	S																						T	T						S	S					S									G	G	.	G													T	T			B		G	G	G		S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.		.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.