Job Description P77748 Confidence 100.00% Date Thu Jan 5 12:32:29 GMT 2012 Rank 8 Aligned Residues 423 % Identity 22% Template c2bvfA_ PDB info PDB header:oxidase Chain: A: PDB Molecule:6-hydroxy-d-nicotine oxidase; PDBTitle: crystal structure of 6-hydoxy-d-nicotine oxidase from2 arthrobacter nicotinovorans. crystal form 3 (p1) Resolution 1.92 Å

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		27	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.
Predicted Secondary structure									.	.																																																																.
Query SS confidence									.	.																																																																.
Query Sequence		F	T	G	D	T	A	T	.	.	S	Y	A	D	R	L	T	M	S	T	D	N	S	I	Y	Q	L	L	P	D	A	V	V	F	P	R	S	T	A	D	V	A	L	I	A	R	L	A	A	Q	E	R	Y	S	S	L	I	F	T	P	R	G	G	G	T	G	T	N	G	Q	A	L	N	.	Q	G	I	I	V	D	M
Query Conservation									.	.																																																																.
Alig confidence									.	.																																										.	.	.																				.
Template Conservation																																																				.	.	.
Template Sequence		I	Q	G	E	V	I	Y	P	D	D	S	G	F	D	A	I	A	N	I	W	D	G	R	H	L	Q	R	P	S	L	I	A	R	C	L	S	A	G	D	V	A	K	S	V	R	Y	A	C	D	N	.	.	.	G	L	E	I	S	V	R	S	G	G	H	N	P	N	G	Y	A	T	N	D	G	G	I	V	L	D	L
Template Known Secondary structure			S	S					T	T	S	T	T								S		T	T						S							S															.	.	.	T							S	S				T	T		T	T			S	S	S
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	H	M	N	R	I	I	E	I	N	P	E	E	G	W	V	R	V	E	A	G	V	I	K	D	Q	L	N	Q	Y	L	K	P	F	G	Y	F	F	A	P	E	L	S	T	S	N	R	A	T	L	G	G	M	I	N	T	D	A	S	G	Q	G	S	L	V	Y	G	K	T	S	D	H	V	L	G	V	R	A	V
Query Conservation
Alig confidence				.					.																																	.	.
Template Conservation				.					.																																	.	.
Template Sequence		R	L	.	M	N	S	I	.	H	I	D	T	A	G	S	R	A	R	I	G	G	G	V	I	S	G	D	L	V	K	E	A	A	K	F	G	L	A	A	V	.	.	T	G	M	H	P	K	V	G	F	C	G	L	A	L	N	G	G	V	G	F	L	T	P	K	Y	G	L	A	S	D	N	I	L	G	A	T	L	V
Template Known Secondary structure		T	T	.					.				T	T	T	T						T	T		B										T	T	T					.	.			S		T	T	S	B						T	T					T	T							G	G	G	G
Template Predicted Secondary structure				.					.																																	.	.
Template SS confidence
		89	90		.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	G	D	I	L	D	T	Q	P	L	P	V	E	L	A	E	T	L	G	K	S	N	T	T	I	G	R	I	Y	N	T	V	Y	Q	R	C	R	Q	Q	R	Q	L	I	I	D	N	F	P	K	L	N	R	F	L	T	G	Y	D	L	R	H	V	F	N	D	E	M	T	E	F	D	L	T	R	I	L	T	G
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	T	G	D	V	I	Y	C	S	D	D	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	L	F	W	A	V	R	G
Template Known Secondary structure			T	T	S							S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.																																																										.	180	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	G	T	L	A	F	I	T	E	A	R	L	D	I	T	R	L	P	K	V	R	R	L	V	N	V	K	Y	D	S	F	D	S	A	L	R	N	A	P	F	M	V	E	A	R	A	L	S	V	E	T	V	D	S	K	V	L	N	L	A	R	E	D	I	V	W	H	S	V	S	E	L	I	T	D	V	P	D	Q
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	P	N	F	G	V	V	T	E	V	E	V	Q	L	Y	E	L	P	R	K	M	L	A	G	F	I	T	W	A	P	S	V	S	E	L	A	G	L	L	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	D	A	L	N	E	M	A	D	H	I	Y	P	S	V	F	V	G	V	D	E	N
Template Known Secondary structure			G	G	G	T																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T											T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	L	G	L	N	I	V	E	F	A	G	D	D	E	A	L	I	D	E	R	V	N	A	L	C	A	R	L	D	E	L	I	A	S	H	Q	A	G	V	I	G	W	Q	V	C	R	E	L	A	G	V	E	R	I	Y	A	M	R	K	K	A	V	G	L	L	G	N	A	K	G	A	A	K	P	I	P	F	A	E
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	P	S	V	T	V	C	V	G	H	L	G	G	L	D	I	A	E	R	D	I	A	R	L	R	G	L	G	R	T	V	S	D	S	I	A	V	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	E	V	V	A	L	N	A	E	V	G	S	F	E	D	G	M	S	N	L	W	I	D	R
Template Known Secondary structure														S														T	T	S			S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S					S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.																.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.																	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	C	V	P	P	E	H	L	A	D	Y	I	A	E	F	R	A	L	L	D	S	H	G	L	S	Y	G	M	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	D	A	G	V	L	H	V	R	P	A	L	D	M	C	D	P	Q	Q	E	I	L	M	K	Q	I	S	D	D	V	V	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	A	M	P	N	A	R	F	A	E	A	I	A	G	N	L	D	K	F	V	S	E	P	A	S	G	G	S	V	K	L	E	I	E	G	M	P	F	G	N	P	K	R	T	P	A	R	H	R	D	A	M	G	V	L	A	L	A	E	W	S	G	A	A	P	G	S	E	K	Y	P	E	L	A	R	E	L	D	A
Template Known Secondary structure					S											T	T	G	G	G					T	T	T	T															T	T			S	S				S	S											T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.				.	500	.	.	.		.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure													.	.	.						.
Query SS confidence													.	.	.						.
Query Sequence		L	T	A	K	Y	G	G	L	L	W	G	.	.	.	E	H	G	K	G	.	F	R	A	E	Y	S	P	A	F	F	G	E	E	L	F	A	E	L	R	K	V	K	A	A	F	D	P	H	N	R	L	N	P	G	K	I	C	P	P	E
Query Conservation													.	.	.						.
Alig confidence													.	.	.						.
Template Conservation
Template Sequence		A	L	L	R	A	G	V	T	T	S	G	F	G	L	L	N	N	N	S	E	V	T	A	E	M	V	A	E	V	Y	K	P	E	V	Y	S	R	L	A	A	V	K	R	E	Y	D	P	E	N	R	F	R	H	N	Y	N	I	D	P	E
Template Known Secondary structure						T	T									G	G	G		S	S																											T	T					S	S	S
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.