Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9K9
Confidence100.00%DateThu Jan 5 11:10:36 GMT 2012
Rank6Aligned Residues134
% Identity25%Templatec3pr9A_
PDB info PDB header:chaperoneChain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase; PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20......... 30.........40.........50.........60........
Predicted Secondary structure 












..............














Query SS confidence 


























. . . . . . . . . . . . . .






































Query Sequence  VAKDLVVSLAYQVRTEDGVLVDESPVS. . . . . . . . . . . . . . APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAY
Query Conservation 
     
 
 
     

 
 


   .............. 
  
  
 
  




 

 

  

   
 
 
  

Alig confidence 














.










..............






































Template Conservation 
  

 
 
 
    .

 




    
             
  
  
 
  
 


 

 

  

   
 
 

 

Template Sequence  VEKGKMVKISYDGYV. DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF
Template Known Secondary structure 

TT
.TTS
T


TTS

S
TTSSSS


TT

GGGTT
Template Predicted Secondary structure 




.



































Template SS confidence 















































































   2.......10...... ...20.........30.........40.........50.........60.........70.........80
 
   6970.........80....... ..90.........100.........110.........120.........130.........140.
Predicted Secondary structure 







.
























Query SS confidence 


















.





















































Query Sequence  GQYDENLVQRVPKDVFMGV. DELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIRE
Query Conservation 

 
  

  

   
   .  
  
  
      
     
  
    
 

 






 
 
 


  

 
Alig confidence 


















.










....






































Template Conservation 
  
  

  

   
         
     ....    
 
  
    
 

 






 
 
 


  


Template Sequence  GKRDPSKIKLIPLSEFTKRGIKPIKGLTITI. . . . DGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVD
Template Known Secondary structure 



GGGTT



TT
....TTTT
S
TTTT


Template Predicted Secondary structure 














....















Template SS confidence 









































































   81........90.........100.........110. ........120.........130.........140.........150
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions