Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9K9
Confidence99.60%DateThu Jan 5 11:10:36 GMT 2012
Rank14Aligned Residues94
% Identity22%Templatec2vcdA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:outer membrane protein mip; PDBTitle: solution structure of the fkbp-domain of legionella2 pneumophila mip in complex with rapamycin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  KVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPK
Query Conservation   
     
 
 
     

 
 


    
  
  
 
  




 

 

  

   
 
 
  



 
  

  

 
Alig confidence 




























.












































..


Template Conservation   
  

 
 
 
     

     
    . 
        
 
    
  

 

     

  



  
    ..

 
Template Sequence  KPGKSDTVTVEYTGRLIDGTVFDSTEKTG. KPATFQVSQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGP. . IGP
Template Known Secondary structure 


TTS
TTS
STTTT.

TTTS
S
TT

GGGTT
SS

SSS..

T
Template Predicted Secondary structure 














.






















..


Template SS confidence 















































































   44.....50.........60.........70.. .......80.........90.........100.........110....... ..120
 
   82.......90.........100.........110.........120.........130.........140...
Predicted Secondary structure 






























Query SS confidence 





























































Query Sequence  DVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREAT
Query Conservation    
     
  
  
      
     
  
    
 

 






 
 
 


  

 

Alig confidence  .............................................
















Template Conservation  .............................................   
 
 


  
   
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NETLIFKIHLISVKKSS
Template Known Secondary structure  .............................................T





Template Predicted Secondary structure  .............................................





Template SS confidence 





























































   121........130.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions