Job Description P0A9K9 Confidence 21.71% Date Thu Jan 5 11:10:36 GMT 2012 Rank 114 Aligned Residues 56 % Identity 11% Template c2jvvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of e. coli nusg carboxyterminal domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																					.										.	.
Query SS confidence																					.										.	.
Query Sequence		M	G	V	D	E	L	Q	V	G	M	R	F	L	A	E	T	D	Q	G	.	P	V	P	V	E	I	T	A	V	.	.	E	D	D	H	V	V	V	D	G	N	H	M	L	A	G	Q	N	L	K	F	N	V	E	V	V	A	I	R	E	A
Query Conservation																					.										.	.
Alig confidence																					.										.	.											.	.
Template Conservation																																											.	.
Template Sequence		R	P	K	T	L	F	E	P	G	E	M	V	R	V	N	D	G	P	F	A	D	F	N	G	V	V	E	E	V	D	Y	E	K	S	R	L	K	V	S	V	S	.	.	I	F	G	R	A	T	P	V	E	L	D	F	S	Q	V	E	K	A
Template Known Secondary structure									T	T							S	S	T	T	T	T										T	T	T	T								.	.		T	T									T	T	T
Template Predicted Secondary structure																																											.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions