Job Description P0A9K9 Confidence 98.99% Date Thu Jan 5 11:10:36 GMT 2012 Rank 46 Aligned Residues 91 % Identity 27% Template c1w26B_ PDB info PDB header:chaperone Chain: B: PDB Molecule:trigger factor; PDBTitle: trigger factor in complex with the ribosome forms a2 molecular cradle for nascent proteins Resolution 2.7 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	K	D	L	V	V	S	L	A	Y	Q	V	R	T	E	D	G	V	L	V	D	E	S	P	V	S	A	P	L	D	Y	L	H	G	H	G	S	L	I	S	G	L	E	T	A	L	E	G	H	E	V	G	D	K	F	D	V	A	V	G	A	N	D	A	Y	G	Q	Y	D	E	N	L	V	Q	R	V	P	K	D
Query Conservation
Alig confidence																	.													.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.													.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	A	E	D	R	V	T	I	D	F	T	G	S	V	.	D	G	E	E	F	E	G	G	K	A	S	D	.	F	V	L	A	X	G	Q	G	R	X	I	P	G	F	E	D	G	I	K	G	H	K	A	G	E	E	F	T	I	D	V	T	F	P	E	E	Y	H	A	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T											B	.	T	T	B			T	T						.					S	S	S			S		T	T						T	T			T	T											T	T		S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.													.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	M	G	V	D	E	L	Q	V	G	M	R	F	L	A	E	T	D	Q	G	P	V	P	V	E	I	T	A	V	E	D	D	H	V	V	V	D	G	N	H	M	L	A	G	Q	N	L	K	F	N	V	E	V	V	A	I	R	E	A	T	E	E	E	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	L	K	G	K	A	A	K	F	A	I	N	L	K	K	V	E	E	R	E	L	P	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																										224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions