 |
| Job Description | P33920 | | Confidence | 9.50% | Date | Thu Jan 5 11:52:46 GMT 2012 |
| Rank | 25 | Aligned Residues | 26 |
| % Identity | 23% | Template | c3eudE_ |
| PDB info |
PDB header:nuclear protein | Chain: E: PDB Molecule:protein shq1; |
PDBTitle: structure of the cs domain of the essential h/aca rnp2 assembly protein shq1p
|
| Resolution | 2.40 Å |
|
| | |
292 | . | . | . | . | . | . | . | 300 | . | . | . | |
|
|
. | . | . | . | . | . | 310 | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | |  |  | | | |
|
| . | . | . | | | | | |
|
|
|
| | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | T | I | N | F | D | A | M | L | L | G | E | . |
. |
. |
R | I | F | W | D | P | A | T | D | T | L | T | I | K |
| Query Conservation | |
| |
| |
| | | | | | | | . | . | . | |
| | |
| | | | | |
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
|
| | |
| |
|
| | | | |
|
|
|
| | | |
| | |
|
| |
| Template Sequence | |
L | R | L | R | F | P | H | E | L | I | D | D | E | R | S | T | A | Q | Y | D | S | K | D | E | C | I | N | V | K |
| Template Known Secondary structure | |
| | | |
| S | S |
| | |
| S | T | T |
| | | | | | T | T | T | T | | | | | |
| Template Predicted Secondary structure | |
| | | |
|
|
|
| | | |
|
|
|
| | | | | |
|
|
|
| | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
