Return to main results Retrieve Phyre Job Id

Job DescriptionP33920
Confidence34.88%DateThu Jan 5 11:52:46 GMT 2012
Rank4Aligned Residues43
% Identity12%Templatec3c4iA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna-binding protein hu homolog; PDBTitle: crystal structure analysis of n terminal region containing the2 dimerization domain and dna binding domain of hu protein(histone like3 protein-dna binding) from mycobacterium tuberculosis [h37rv]
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   203......210.........220.........230.........240.....
Predicted Secondary structure 









Query SS confidence 










































Query Sequence  QAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSL
Query Conservation    
  
                 
     
       
 
 

Alig confidence 










































Template Conservation 


  

     
   
  

      
   
  
  
 
 

Template Sequence  ELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGF
Template Known Secondary structure  T

TT

TTT
Template Predicted Secondary structure 








Template SS confidence 










































   5....10.........20.........30.........40.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions