Job Description P04993 Confidence 98.68% Date Thu Jan 5 10:58:32 GMT 2012 Rank 41 Aligned Residues 107 % Identity 21% Template c2ja1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor. Resolution 2.8 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R
Query Conservation
Alig confidence																															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	W	I	E	V	I	C	G	S	M	F	S	G	K	S	E	E	L	I	R	R	V	R	R	T	Q	F	A	.	.	.	.	K	Q	H	A	I	V	F	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	I	D	N	R	Y	S	E	E	D	V	V	S	H	N
Template Known Secondary structure											S	T	T	S	S															T	.	.	.	.	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			S	S		S	S					T	T
Template Predicted Secondary structure																															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.																								.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	L	G	A	Q	P	G	S	Q	R	L	R	H	H	A	G	N	P	L	.	.	H	L	D	V	L	V	V	D	E	A	S	M	I	D	L	P	M	M	S	R	L	I	D	A	L	P	D	H	A	R	V	I	F	L	G
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		G	L	K	V	K	A	V	P	V	S	A	S	K	D	I	F	E	H	I	T	E	E	L	D	V	I	A	I	D	E	V	Q	F	F	D	G	D	I	V	E	V	V	Q	V	L	A	N	R	G	Y	R	V	I	V	A	G
Template Known Secondary structure		S									S	S	G	G	G	G	G	G	G			S	S							S	S	G	G	G	S		T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions