41 c2ja1A_ Probab=98.68   E-value=4.8e-08  Score=66.57  Aligned_columns=107  Identities=21%

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH
Q ss_conf             19859998189875578999999999996046896799980152799999999998640012110023320136899998
Q batch____       163 TRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHR  242 (608)
Q Consensus       163 ~~~~~iI~G~pGTGKTt~i~~~i~~L~~~~~~~~~~Ill~ApT~kAa~~L~~~l~~~~~~~~~~~~~~~~~~~~a~ti~~  242 (608)
                      .+++.+|+||+||||||++..++..+...    +.+|++..|                       .............|.
T Consensus         9 ~G~i~li~Gp~gSGKTt~L~~~l~~~~~~----~~~v~~i~~-----------------------~~~~r~~~~~i~~~~   61 (193)
T c2ja1A_           9 NGWIEVICGSMFSGKSEELIRRVRRTQFA----KQHAIVFKP-----------------------CIDNRYSEEDVVSHN   61 (193)
T ss_dssp             CCEEEEEEESTTSSHHHHHHHHHHHHHHT----TCCEEEEEE-----------------------TTCCSSCSSEEECTT
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHC----CCEEEEECC-----------------------CCCCHHHCCCEEHHC
T ss_conf             97399997697897899999999973327----976999728-----------------------630011014530220


Q ss_pred             HHCCCCCCCHHHHHHCCCC--CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf             7102665302223212334--79889994822299999999999863398799934
Q batch____       243 LLGAQPGSQRLRHHAGNPL--HLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLG  296 (608)
Q Consensus       243 ~l~~~~~~~~~~~~~~~~l--~~d~iivDEasmv~~~~~~~ll~~l~~~~rlilvG  296 (608)
                      .+........+.......+  ..|+++|||+++++......+..+...+..++..|
T Consensus        62 g~~~~~~~~~~~~~l~~~l~~~~dvIiIDE~qfl~~~~~e~~~~l~~~g~~Vi~~g  117 (193)
T c2ja1A_          62 GLKVKAVPVSASKDIFEHITEELDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAG  117 (193)
T ss_dssp             SCEEECEEESSGGGGGGGCCSSCCEEEESSGGGSCTTHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             84347764480799999974499899986854389889999999997798799994