Return to main results Retrieve Phyre Job Id

Job DescriptionP33236
Confidence2.43%DateThu Jan 5 11:51:37 GMT 2012
Rank54Aligned Residues13
% Identity62%Templatec2gohA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:vpu protein; PDBTitle: three-dimensional structure of the trans-membrane domain of2 vpu from hiv-1 in aligned phospholipid bicelles
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........
Predicted Secondary structure 
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Query Sequence  IVALIVICITAVV
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Template Sequence  IVALVVAIIIAIV
Template Predicted Secondary structure 
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   8.10.........20
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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