Return to main results Retrieve Phyre Job Id

Job DescriptionP37338
Confidence95.20%DateThu Jan 5 11:55:19 GMT 2012
Rank94Aligned Residues85
% Identity7%Templated2bv6a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60. ........70.........80.........90.........100
Predicted Secondary structure 












...







Query SS confidence 





































. . .






































Query Sequence  DEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVNQ. . . KGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEW
Query Conservation 
  
 
 


   



 





  
   


    
... 
  
                                  
Alig confidence 





































...



























...







Template Conservation      
  


  
      

  
  
   


 
     
 
   
 

  
                ...   
   
Template Sequence  ESPVNVKKVVTELALDTGTVSPLLKRXEQVDLIKRERSEVDQREVFIHLTDKSETIRPELSNASDKVAS. . . ASSLSQDE
Template Known Secondary structure  SSTT

TTTTTS
SSSTT

TT...TT

Template Predicted Secondary structure 














...



Template SS confidence 















































































   50.........60.........70.........80.........90.........100.........110........ .120......
 
   101........110.
Predicted Secondary structure 
Query SS confidence 










Query Sequence  EADVLAKAHLL
Query Conservation             
Alig confidence 










Template Conservation     
  

  
Template Sequence  VKELNRLLGKV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 










   127..130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions