Job Description P37338 Confidence 92.66% Date Thu Jan 5 11:55:19 GMT 2012 Rank 167 Aligned Residues 96 % Identity 8% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.									.	.	.	80	.	.
Predicted Secondary structure																								.	.	.	.																																									.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.																																									.	.	.	.	.	.	.	.
Query Sequence		D	I	I	R	G	N	F	Q	P	D	E	K	L	R	M	S	L	L	T	S	R	Y	.	.	.	.	A	L	G	V	G	P	L	R	E	A	L	S	Q	L	V	A	E	R	L	V	T	V	V	N	Q	K	G	Y	R	V	A	S	M	S	E	Q	E	L	L	D	.	.	.	.	.	.	.	.	I	F	D	A	R	A
Query Conservation																								.	.	.	.																																									.	.	.	.	.	.	.	.
Alig confidence												.												.	.	.	.																																									.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		D	V	X	N	I	I	W	D	K	K	.	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	S	E	N	I	Y	F	Y	S	S	N	I	K	E	D	D	I	K	X	K	T	A	K	T	F	L	N	K	L	Y	G
Template Known Secondary structure										S	S	.	S												T	T	S																	T	T	S							T	T								S																			T
Template Predicted Secondary structure												.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		N	M	E	A	M	L	V	S	L	A	I	A	R	.	.	G	G	D	E	W	E	A	D	V	L	A	K	A	H	L	L
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		G	D	X	K	S	L	V	L	N	F	A	K	N	E	E	L	N	N	K	E	I	E	E	L	R	D	I	L	N	D	I
Template Known Secondary structure		T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions