 |
| Job Description | P37338 | | Confidence | 29.74% | Date | Thu Jan 5 11:55:19 GMT 2012 |
| Rank | 455 | Aligned Residues | 58 |
| % Identity | 12% | Template | d1lvaa4 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| C-terminal fragment of elongation factor SelB
|
| Resolution | 2.12 |
|
|   |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | G | Y | R | W | L | K | N | D | I | I | R | G | N | F | Q | P | D | E | K | L | R | M | S | L | L | T | S | R | Y | A | L | G | V | G | P | L | R | E | A | L | S | Q | L | V | A | E | R | L | V | T | V | V | N | Q | K | G | Y | R | V |
| Query Conservation |   |
  |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |   |   |
|   |   |   |   |   | . | . |
|   |   |   |
|   |
|
|   |
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |
|
|
|
|
| Template Sequence |   |
Q | A | L | G | E | A | R | E | V | I | K | N | . |
. |
L | A | S | T | G | P | F | G | L | A | E | A | R | D | A | L | G | S | S | R | K | Y | V | L | P | L | L | E | Y | L | D | Q | V | K | F | T | R | R | V | G | D | K | R | V | V | V |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | T | T | S |
| B |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T |  |  |  |  |
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
575 | . | . | . | . | 580 | . | . | . | . | . | . | |
|
. | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|