Job Description P37338 Confidence 100.00% Date Thu Jan 5 11:55:19 GMT 2012 Rank 2 Aligned Residues 203 % Identity 17% Template c3ihuA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of dna binding protein (yp_298823.1) from ralstonia2 eutropha jmp134 at 1.92 a resolution Resolution 1.92 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	D	G	Y	R	W	L	K	N	D	I	I	R	G	N	F	Q	P	D	E	K	L	R	M	S	L	L	T	S	R	Y	A	L	G	V	G	P	L	R	E	A	L	S	Q	L	V	A	E	R	L	V	T	V	V	N	Q	K	G	Y	R	V	A	S	M	S	E	Q	E	L	L	D	I	F	D	A	R	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	D	T	V	F	F	G	I	X	S	G	L	E	L	G	T	F	V	P	G	Q	R	L	V	E	T	D	L	V	A	H	F	G	V	G	R	N	S	V	R	E	A	L	Q	R	L	A	A	E	G	I	V	D	L	Q	R	H	R	G	A	V	I	R	R	L	S	L	Q	E	T	L	D	V	L	D	V	A	E	R
Template Known Secondary structure																	T	S	S		T	T													T																T	T	S					S	T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	A	M	L	V	S	L	A	I	A	R	G	G	D	E	W	E	A	D	V	L	A	K	A	H	L	L	S	K	L	E	A	C	D	A	S	E	K	M	L	D	E	W	D	L	R	H	Q	A	F	H	T	A	I	V	A	G	C	G	S	H	Y	L	L	Q	M	R	E	R	L	F	D	L	A	A	R	Y	R	F
Query Conservation
Alig confidence																	.	.	.																																																														.
Template Conservation																	.	.	.																																																														.
Template Sequence		X	T	G	L	L	A	R	A	A	T	R	G	S	G	N	.	.	.	Q	P	Q	V	Q	A	L	R	A	S	V	Q	A	L	V	A	A	E	K	A	Q	D	G	E	T	F	S	N	A	R	R	H	F	Y	R	T	L	L	E	X	G	D	N	R	E	L	R	R	L	F	P	T	I	H	X	P	I	V	H	A	Q	.
Template Known Secondary structure											G	G	G	T	T		.	.	.																				T	T																																									.
Template Predicted Secondary structure																	.	.	.																																																														.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	L	R	R	T	V	L	S	V	E	M	L	E	D	K	H	D	Q	H	Q	T	L	T	A	A	V	L	A	R	D	T	A	R	A	S	E	L	M	R	Q	H	L	L	T	P	I	P	I	I	Q	Q	A
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	H	R	L	A	S	L	R	Q	X	R	L	D	D	Y	R	R	I	A	T	A	V	L	A	G	E	P	D	A	A	E	A	A	G	A	A	H	V	K	N	V	R	G	A	I	L	D	R
Template Known Secondary structure		.	.	.	.	.	.	T	T	G	G	G	G																		T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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